ID   PP394_ARATH             Reviewed;         685 AA.
AC   P0C8Q8; Q3E9D2;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   10-FEB-2009, sequence version 1.
DT   03-AUG-2022, entry version 81.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g19020, mitochondrial;
DE   Flags: Precursor;
GN   Name=PCMP-E42; OrderedLocusNames=At5g19020; ORFNames=T16G12_60;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA   Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA   Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA   Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA   O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA   Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA   Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA   Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA   Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA   Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA   Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA   Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA   Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL   Nature 408:823-826(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AC068809; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CP002688; AED92640.1; -; Genomic_DNA.
DR   RefSeq; NP_197403.2; NM_121907.3.
DR   AlphaFoldDB; P0C8Q8; -.
DR   SMR; P0C8Q8; -.
DR   STRING; 3702.AT5G19020.1; -.
DR   PaxDb; P0C8Q8; -.
DR   PRIDE; P0C8Q8; -.
DR   ProteomicsDB; 249275; -.
DR   EnsemblPlants; AT5G19020.1; AT5G19020.1; AT5G19020.
DR   GeneID; 832021; -.
DR   Gramene; AT5G19020.1; AT5G19020.1; AT5G19020.
DR   KEGG; ath:AT5G19020; -.
DR   Araport; AT5G19020; -.
DR   TAIR; locus:2179619; AT5G19020.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_1_1; -.
DR   InParanoid; P0C8Q8; -.
DR   OMA; RWAHEYI; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; P0C8Q8; -.
DR   PRO; PR:P0C8Q8; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; P0C8Q8; baseline and differential.
DR   Genevisible; P0C8Q8; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0080156; P:mitochondrial mRNA modification; IMP:TAIR.
DR   Gene3D; 1.25.40.10; -; 5.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 7.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 3.
DR   TIGRFAMs; TIGR00756; PPR; 8.
DR   PROSITE; PS51375; PPR; 14.
PE   2: Evidence at transcript level;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..23
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           24..685
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g19020, mitochondrial"
FT                   /id="PRO_0000363531"
FT   REPEAT          40..74
FT                   /note="PPR 1"
FT   REPEAT          75..105
FT                   /note="PPR 2"
FT   REPEAT          106..136
FT                   /note="PPR 3"
FT   REPEAT          137..171
FT                   /note="PPR 4"
FT   REPEAT          172..206
FT                   /note="PPR 5"
FT   REPEAT          207..237
FT                   /note="PPR 6"
FT   REPEAT          238..268
FT                   /note="PPR 7"
FT   REPEAT          269..303
FT                   /note="PPR 8"
FT   REPEAT          304..338
FT                   /note="PPR 9"
FT   REPEAT          339..369
FT                   /note="PPR 10"
FT   REPEAT          370..400
FT                   /note="PPR 11"
FT   REPEAT          401..435
FT                   /note="PPR 12"
FT   REPEAT          437..471
FT                   /note="PPR 13"
FT   REPEAT          472..502
FT                   /note="PPR 14"
FT   REPEAT          506..540
FT                   /note="PPR 15"
FT   REPEAT          541..576
FT                   /note="PPR 16"
FT   REPEAT          577..607
FT                   /note="PPR 17"
FT   REGION          612..685
FT                   /note="Type E motif; degenerate"
SQ   SEQUENCE   685 AA;  76247 MW;  61EFC9EA4AEF702A CRC64;
     MIKLIRFFRS RRCWVISLQA RCFSAPSRTH FDFSGESSDT ERALVSALGS CASSNDVTCG
     RQIHCRVLKS GLDSNGYICN SVLNMYAKCR LLADAESVFR DHAKLDSASF NIMVDGYVRS
     RRLWDALKLF DVMPERSCVS YTTLIKGYAQ NNQWSEAMEL FREMRNLGIM LNEVTLATVI
     SACSHLGGIW DCRMLQSLAI KLKLEGRVFV STNLLHMYCL CLCLKDARKL FDEMPERNLV
     TWNVMLNGYS KAGLIEQAEE LFDQITEKDI VSWGTMIDGC LRKNQLDEAL VYYTEMLRCG
     MKPSEVMMVD LLSASARSVG SSKGLQLHGT IVKRGFDCYD FLQATIIHFY AVSNDIKLAL
     QQFEASVKDH IASRNALIAG FVKNGMVEQA REVFDQTHDK DIFSWNAMIS GYAQSLSPQL
     ALHLFREMIS SSQVKPDAIT MVSVFSAISS LGSLEEGKRA HDYLNFSTIP PNDNLTAAII
     DMYAKCGSIE TALNIFHQTK NISSSTISPW NAIICGSATH GHAKLALDLY SDLQSLPIKP
     NSITFVGVLS ACCHAGLVEL GKTYFESMKS DHGIEPDIKH YGCMVDLLGK AGRLEEAKEM
     IKKMPVKADV MIWGMLLSAS RTHGNVEIAE LAATELAAID PSHGGCKVML SNVYADAGRW
     EDVALVREEM RTRDVEWSRA FSGVV