ID   PP398_ARATH             Reviewed;         691 AA.
AC   O04659;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   10-FEB-2009, sequence version 2.
DT   25-MAY-2022, entry version 113.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g27110;
GN   Name=PCMP-E14; OrderedLocusNames=At5g27110;
GN   ORFNames=A_TM021B04.2, T21B4.20;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130714; DOI=10.1038/35048507;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA   Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA   Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA   Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA   O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA   Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA   Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA   Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA   Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA   Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA   Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA   Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA   Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA   Bevan M., Fransz P.F.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL   Nature 408:823-826(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=10809006; DOI=10.1023/a:1006352315928;
RA   Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT   "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT   unique to plants.";
RL   Plant Mol. Biol. 42:603-613(2000).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAB61067.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AF007271; AAB61067.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002688; AED93651.1; -; Genomic_DNA.
DR   PIR; T01808; T01808.
DR   RefSeq; NP_198063.1; NM_122593.2.
DR   AlphaFoldDB; O04659; -.
DR   SMR; O04659; -.
DR   PaxDb; O04659; -.
DR   PRIDE; O04659; -.
DR   EnsemblPlants; AT5G27110.1; AT5G27110.1; AT5G27110.
DR   GeneID; 832769; -.
DR   Gramene; AT5G27110.1; AT5G27110.1; AT5G27110.
DR   KEGG; ath:AT5G27110; -.
DR   Araport; AT5G27110; -.
DR   TAIR; locus:2181201; AT5G27110.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_10_1; -.
DR   InParanoid; O04659; -.
DR   OMA; CYYQDGQ; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; O04659; -.
DR   PRO; PR:O04659; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; O04659; baseline and differential.
DR   Genevisible; O04659; AT.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; -; 5.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 4.
DR   TIGRFAMs; TIGR00756; PPR; 6.
DR   PROSITE; PS51375; PPR; 16.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..691
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g27110"
FT                   /id="PRO_0000363535"
FT   REPEAT          38..68
FT                   /note="PPR 1"
FT   REPEAT          70..104
FT                   /note="PPR 2"
FT   REPEAT          106..140
FT                   /note="PPR 3"
FT   REPEAT          141..171
FT                   /note="PPR 4"
FT   REPEAT          172..206
FT                   /note="PPR 5"
FT   REPEAT          207..241
FT                   /note="PPR 6"
FT   REPEAT          242..272
FT                   /note="PPR 7"
FT   REPEAT          273..307
FT                   /note="PPR 8"
FT   REPEAT          308..342
FT                   /note="PPR 9"
FT   REPEAT          343..373
FT                   /note="PPR 10"
FT   REPEAT          374..408
FT                   /note="PPR 11"
FT   REPEAT          409..443
FT                   /note="PPR 12"
FT   REPEAT          444..474
FT                   /note="PPR 13"
FT   REPEAT          475..509
FT                   /note="PPR 14"
FT   REPEAT          510..540
FT                   /note="PPR 15"
FT   REPEAT          546..576
FT                   /note="PPR 16"
FT   REGION          582..657
FT                   /note="Type E motif"
FT   REGION          658..688
FT                   /note="Type E(+) motif"
SQ   SEQUENCE   691 AA;  77985 MW;  C62990DACA792597 CRC64;
     MESSKLLSLL RECTNSTKSL RRIKLVHQRI LTLGLRRDVV LCKSLINVYF TCKDHCSARH
     VFENFDIRSD VYIWNSLMSG YSKNSMFHDT LEVFKRLLNC SICVPDSFTF PNVIKAYGAL
     GREFLGRMIH TLVVKSGYVC DVVVASSLVG MYAKFNLFEN SLQVFDEMPE RDVASWNTVI
     SCFYQSGEAE KALELFGRME SSGFEPNSVS LTVAISACSR LLWLERGKEI HRKCVKKGFE
     LDEYVNSALV DMYGKCDCLE VAREVFQKMP RKSLVAWNSM IKGYVAKGDS KSCVEILNRM
     IIEGTRPSQT TLTSILMACS RSRNLLHGKF IHGYVIRSVV NADIYVNCSL IDLYFKCGEA
     NLAETVFSKT QKDVAESWNV MISSYISVGN WFKAVEVYDQ MVSVGVKPDV VTFTSVLPAC
     SQLAALEKGK QIHLSISESR LETDELLLSA LLDMYSKCGN EKEAFRIFNS IPKKDVVSWT
     VMISAYGSHG QPREALYQFD EMQKFGLKPD GVTLLAVLSA CGHAGLIDEG LKFFSQMRSK
     YGIEPIIEHY SCMIDILGRA GRLLEAYEII QQTPETSDNA ELLSTLFSAC CLHLEHSLGD
     RIARLLVENY PDDASTYMVL FNLYASGESW DAARRVRLKM KEMGLRKKPG CSWIEMSDKV
     CHFFAEDRSH LRAENVYECL ALLSGHMESG Q