PP402_ARATH
ID PP402_ARATH Reviewed; 330 AA.
AC Q9FFZ2; F4K2Z3;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 3.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At5g36300;
GN OrderedLocusNames=At5g36300; ORFNames=T30G6.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AED94067.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAB10889.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AP002549; BAB10889.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AB026661; BAB10889.1; JOINED; Genomic_DNA.
DR EMBL; CP002688; AED94067.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; ANM71076.1; -; Genomic_DNA.
DR RefSeq; NP_001154751.1; NM_001161279.1.
DR RefSeq; NP_001332632.1; NM_001344138.1.
DR AlphaFoldDB; Q9FFZ2; -.
DR SMR; Q9FFZ2; -.
DR PRIDE; Q9FFZ2; -.
DR EnsemblPlants; AT5G36300.2; AT5G36300.2; AT5G36300.
DR GeneID; 3771327; -.
DR Gramene; AT5G36300.2; AT5G36300.2; AT5G36300.
DR KEGG; ath:AT5G36300; -.
DR Araport; AT5G36300; -.
DR InParanoid; Q9FFZ2; -.
DR OMA; ASSICEQ; -.
DR OrthoDB; 1344243at2759; -.
DR PRO; PR:Q9FFZ2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FFZ2; baseline and differential.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13812; PPR_3; 2.
DR TIGRFAMs; TIGR00756; PPR; 4.
DR PROSITE; PS51375; PPR; 8.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..330
FT /note="Putative pentatricopeptide repeat-containing protein
FT At5g36300"
FT /id="PRO_0000363539"
FT REPEAT 10..44
FT /note="PPR 1"
FT REPEAT 45..75
FT /note="PPR 2"
FT REPEAT 83..113
FT /note="PPR 3"
FT REPEAT 114..148
FT /note="PPR 4"
FT REPEAT 149..179
FT /note="PPR 5"
FT REPEAT 185..215
FT /note="PPR 6"
FT REPEAT 231..265
FT /note="PPR 7"
FT REPEAT 266..296
FT /note="PPR 8"
FT REPEAT 302..330
FT /note="PPR 9"
SQ SEQUENCE 330 AA; 38107 MW; 62EB8D787DC10F5F CRC64;
MAPISHTRIS LSMYNSWIRY FCRTGETNEA MSLLAEIHSL GSRPDPLSYV SFIETLASLR
RTLEADALFH EVVRFMIYGS YSVRLYNALV SRYLRKEVSW RVVNEMKKRK FRLNSFVYGK
IIRIYRDNGM WKKALGIVEE IREIGLPMDV EIYNSVIDTF GKYGELDEEL QVLEKLQRSS
DSRPNIRTWN SLIRWHCHHG AVDMALELFT MIFEDIGELV GKLKSQGVAP SANLFCTLAN
AYAQQGLCKQ TVKVLKMMEN EGIEPNLIML NVLINAFGTA GKHMEALSIY HHIKETVWIH
PDVVTYSTLM KAFTRAKKYE MVCSFYLVTL