PP403_ARATH
ID PP403_ARATH Reviewed; 550 AA.
AC Q9FHR3;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At5g37570;
GN Name=PCMP-E37; OrderedLocusNames=At5g37570; ORFNames=K12B20.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10470850; DOI=10.1093/dnares/6.3.183;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Kotani H.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence
RT features of the regions of 1,011,550 bp covered by seventeen P1 and TAC
RT clones.";
RL DNA Res. 6:183-195(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=10809006; DOI=10.1023/a:1006352315928;
RA Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT unique to plants.";
RL Plant Mol. Biol. 42:603-613(2000).
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB018107; BAB08303.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94207.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM68719.1; -; Genomic_DNA.
DR RefSeq; NP_001330445.1; NM_001344210.1.
DR RefSeq; NP_198573.1; NM_123116.2.
DR AlphaFoldDB; Q9FHR3; -.
DR SMR; Q9FHR3; -.
DR STRING; 3702.AT5G37570.1; -.
DR PaxDb; Q9FHR3; -.
DR PRIDE; Q9FHR3; -.
DR ProteomicsDB; 249284; -.
DR EnsemblPlants; AT5G37570.1; AT5G37570.1; AT5G37570.
DR EnsemblPlants; AT5G37570.2; AT5G37570.2; AT5G37570.
DR GeneID; 833735; -.
DR Gramene; AT5G37570.1; AT5G37570.1; AT5G37570.
DR Gramene; AT5G37570.2; AT5G37570.2; AT5G37570.
DR KEGG; ath:AT5G37570; -.
DR Araport; AT5G37570; -.
DR TAIR; locus:2151694; AT5G37570.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_6_1; -.
DR InParanoid; Q9FHR3; -.
DR OMA; MYANIDR; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9FHR3; -.
DR PRO; PR:Q9FHR3; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FHR3; baseline and differential.
DR Genevisible; Q9FHR3; AT.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR045215; PPR_prot_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR24015; PTHR24015; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 2.
DR TIGRFAMs; TIGR00756; PPR; 6.
DR PROSITE; PS51375; PPR; 12.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..550
FT /note="Putative pentatricopeptide repeat-containing protein
FT At5g37570"
FT /id="PRO_0000363540"
FT REPEAT 73..107
FT /note="PPR 1"
FT REPEAT 109..143
FT /note="PPR 2"
FT REPEAT 144..174
FT /note="PPR 3"
FT REPEAT 175..205
FT /note="PPR 4"
FT REPEAT 206..240
FT /note="PPR 5"
FT REPEAT 241..267
FT /note="PPR 6"
FT REPEAT 268..302
FT /note="PPR 7"
FT REPEAT 303..333
FT /note="PPR 8"
FT REPEAT 339..369
FT /note="PPR 9"
FT REPEAT 370..404
FT /note="PPR 10"
FT REPEAT 405..435
FT /note="PPR 11"
FT REPEAT 441..475
FT /note="PPR 12"
FT REGION 476..550
FT /note="Type E motif"
SQ SEQUENCE 550 AA; 61652 MW; 504DAA06E2F627F8 CRC64;
MIQRLSHPSL LSLETLFKLC KSEIHLNQIH ARIIRKGLEQ DQNLISIFIS SSSSSSSSLS
YSSSVFERVP SPGTYLWNHL IKGYSNKFLF FETVSILMRM MRTGLARPDE YTFPLVMKVC
SNNGQVRVGS SVHGLVLRIG FDKDVVVGTS FVDFYGKCKD LFSARKVFGE MPERNAVSWT
ALVVAYVKSG ELEEAKSMFD LMPERNLGSW NALVDGLVKS GDLVNAKKLF DEMPKRDIIS
YTSMIDGYAK GGDMVSARDL FEEARGVDVR AWSALILGYA QNGQPNEAFK VFSEMCAKNV
KPDEFIMVGL MSACSQMGCF ELCEKVDSYL HQRMNKFSSH YVVPALIDMN AKCGHMDRAA
KLFEEMPQRD LVSYCSMMEG MAIHGCGSEA IRLFEKMVDE GIVPDEVAFT VILKVCGQSR
LVEEGLRYFE LMRKKYSILA SPDHYSCIVN LLSRTGKLKE AYELIKSMPF EAHASAWGSL
LGGCSLHGNT EIAEVVARHL FELEPQSAGS YVLLSNIYAA LDRWTDVAHL RDKMNENGIT
KICGRSWISR
