ID   PP412_ARATH             Reviewed;         527 AA.
AC   Q9FLL3;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 107.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g41170, mitochondrial;
DE   Flags: Precursor;
GN   OrderedLocusNames=At5g41170; ORFNames=MEE6.24;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA   Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT   features of the regions of 1,456,315 bp covered by nineteen physically
RT   assigned P1 and TAC clones.";
RL   DNA Res. 5:41-54(1998).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AB010072; BAB09719.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED94650.1; -; Genomic_DNA.
DR   EMBL; BT023465; AAY56456.1; -; mRNA.
DR   RefSeq; NP_198933.1; NM_123482.3.
DR   AlphaFoldDB; Q9FLL3; -.
DR   SMR; Q9FLL3; -.
DR   STRING; 3702.AT5G41170.1; -.
DR   PaxDb; Q9FLL3; -.
DR   PRIDE; Q9FLL3; -.
DR   EnsemblPlants; AT5G41170.1; AT5G41170.1; AT5G41170.
DR   GeneID; 834119; -.
DR   Gramene; AT5G41170.1; AT5G41170.1; AT5G41170.
DR   KEGG; ath:AT5G41170; -.
DR   Araport; AT5G41170; -.
DR   TAIR; locus:2163041; AT5G41170.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_0_1; -.
DR   InParanoid; Q9FLL3; -.
DR   OMA; YILMITN; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9FLL3; -.
DR   PRO; PR:Q9FLL3; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FLL3; baseline and differential.
DR   Genevisible; Q9FLL3; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   Gene3D; 1.25.40.10; -; 6.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 5.
DR   TIGRFAMs; TIGR00756; PPR; 12.
DR   PROSITE; PS51375; PPR; 14.
PE   2: Evidence at transcript level;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..35
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           36..527
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g41170, mitochondrial"
FT                   /id="PRO_0000363549"
FT   REPEAT          36..70
FT                   /note="PPR 1"
FT   REPEAT          71..105
FT                   /note="PPR 2"
FT   REPEAT          106..140
FT                   /note="PPR 3"
FT   REPEAT          141..175
FT                   /note="PPR 4"
FT   REPEAT          176..210
FT                   /note="PPR 5"
FT   REPEAT          211..245
FT                   /note="PPR 6"
FT   REPEAT          246..280
FT                   /note="PPR 7"
FT   REPEAT          281..315
FT                   /note="PPR 8"
FT   REPEAT          316..350
FT                   /note="PPR 9"
FT   REPEAT          351..385
FT                   /note="PPR 10"
FT   REPEAT          386..420
FT                   /note="PPR 11"
FT   REPEAT          424..458
FT                   /note="PPR 12"
FT   REPEAT          459..493
FT                   /note="PPR 13"
FT   REPEAT          494..527
FT                   /note="PPR 14"
SQ   SEQUENCE   527 AA;  59961 MW;  DFFC3644051ED7C4 CRC64;
     MAMRFFQLHR NRLVKGNSGK ALSFSRLLDL SFWVRAFCNY REILRNGLHS LQFNEALDLF
     THMVESRPLP SIIDFTKLLN VIAKMKKFDV VINLCDHLQI MGVSHDLYTC NLLMNCFCQS
     SQPYLASSFL GKMMKLGFEP DIVTFTSLIN GFCLGNRMEE AMSMVNQMVE MGIKPDVVMY
     TTIIDSLCKN GHVNYALSLF DQMENYGIRP DVVMYTSLVN GLCNSGRWRD ADSLLRGMTK
     RKIKPDVITF NALIDAFVKE GKFLDAEELY NEMIRMSIAP NIFTYTSLIN GFCMEGCVDE
     ARQMFYLMET KGCFPDVVAY TSLINGFCKC KKVDDAMKIF YEMSQKGLTG NTITYTTLIQ
     GFGQVGKPNV AQEVFSHMVS RGVPPNIRTY NVLLHCLCYN GKVKKALMIF EDMQKREMDG
     VAPNIWTYNV LLHGLCYNGK LEKALMVFED MRKREMDIGI ITYTIIIQGM CKAGKVKNAV
     NLFCSLPSKG VKPNVVTYTT MISGLFREGL KHEAHVLFRK MKEDGVS