ID   PP429_ARATH             Reviewed;         588 AA.
AC   Q9LTF4;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 116.
DE   RecName: Full=Putative pentatricopeptide repeat-containing protein At5g52630;
GN   Name=PCMP-H52; Synonyms=PCMP-H30; OrderedLocusNames=At5g52630;
GN   ORFNames=F6N7.12;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RA   Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL   Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=10809006; DOI=10.1023/a:1006352315928;
RA   Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT   "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT   unique to plants.";
RL   Plant Mol. Biol. 42:603-613(2000).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AB025606; BAA98081.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED96243.1; -; Genomic_DNA.
DR   RefSeq; NP_200075.1; NM_124641.2.
DR   AlphaFoldDB; Q9LTF4; -.
DR   SMR; Q9LTF4; -.
DR   BioGRID; 20585; 3.
DR   STRING; 3702.AT5G52630.1; -.
DR   PaxDb; Q9LTF4; -.
DR   PRIDE; Q9LTF4; -.
DR   ProteomicsDB; 249310; -.
DR   EnsemblPlants; AT5G52630.1; AT5G52630.1; AT5G52630.
DR   GeneID; 835340; -.
DR   Gramene; AT5G52630.1; AT5G52630.1; AT5G52630.
DR   KEGG; ath:AT5G52630; -.
DR   Araport; AT5G52630; -.
DR   TAIR; locus:2149664; AT5G52630.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_37_8_1; -.
DR   OMA; HGLCFKT; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9LTF4; -.
DR   PRO; PR:Q9LTF4; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9LTF4; baseline and differential.
DR   Genevisible; Q9LTF4; AT.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0016554; P:cytidine to uridine editing; IMP:TAIR.
DR   Gene3D; 1.25.40.10; -; 3.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 1.
DR   SUPFAM; SSF48452; SSF48452; 1.
DR   TIGRFAMs; TIGR00756; PPR; 2.
DR   PROSITE; PS51375; PPR; 9.
PE   3: Inferred from homology;
KW   Reference proteome; Repeat.
FT   CHAIN           1..588
FT                   /note="Putative pentatricopeptide repeat-containing protein
FT                   At5g52630"
FT                   /id="PRO_0000363566"
FT   REPEAT          14..48
FT                   /note="PPR 1"
FT   REPEAT          49..79
FT                   /note="PPR 2"
FT   REPEAT          80..114
FT                   /note="PPR 3"
FT   REPEAT          115..149
FT                   /note="PPR 4"
FT   REPEAT          150..180
FT                   /note="PPR 5"
FT   REPEAT          181..215
FT                   /note="PPR 6"
FT   REPEAT          216..250
FT                   /note="PPR 7"
FT   REPEAT          251..281
FT                   /note="PPR 8"
FT   REPEAT          282..316
FT                   /note="PPR 9"
FT   REPEAT          317..351
FT                   /note="PPR 10"
FT   REPEAT          352..386
FT                   /note="PPR 11"
FT   REGION          387..462
FT                   /note="Type E motif"
FT   REGION          463..493
FT                   /note="Type E(+) motif"
FT   REGION          494..588
FT                   /note="Type DYW motif"
SQ   SEQUENCE   588 AA;  66150 MW;  EFB4B6723BF612CD CRC64;
     MALNSSAFFV PCHNYNQICD LLLSSARTRS TIKGLQLHGY VVKSGLSLIP LVANNLINFY
     SKSQLPFDSR RAFEDSPQKS STTWSSIISC FAQNELPWMS LEFLKKMMAG NLRPDDHVLP
     SATKSCAILS RCDIGRSVHC LSMKTGYDAD VFVGSSLVDM YAKCGEIVYA RKMFDEMPQR
     NVVTWSGMMY GYAQMGENEE ALWLFKEALF ENLAVNDYSF SSVISVCANS TLLELGRQIH
     GLSIKSSFDS SSFVGSSLVS LYSKCGVPEG AYQVFNEVPV KNLGIWNAML KAYAQHSHTQ
     KVIELFKRMK LSGMKPNFIT FLNVLNACSH AGLVDEGRYY FDQMKESRIE PTDKHYASLV
     DMLGRAGRLQ EALEVITNMP IDPTESVWGA LLTSCTVHKN TELAAFAADK VFELGPVSSG
     MHISLSNAYA ADGRFEDAAK ARKLLRDRGE KKETGLSWVE ERNKVHTFAA GERRHEKSKE
     IYEKLAELGE EMEKAGYIAD TSYVLREVDG DEKNQTIRYH SERLAIAFGL ITFPADRPIR
     VMKNLRVCGD CHNAIKFMSV CTRRVIIVRD NNRFHRFEDG KCSCNDYW