PP432_ARATH
ID PP432_ARATH Reviewed; 1096 AA.
AC Q9LVQ5; F4K691;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 2.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g55840;
GN OrderedLocusNames=At5g55840; ORFNames=MWJ3.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AED96686.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAA97283.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB018120; BAA97283.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED96686.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; ANM69571.1; -; Genomic_DNA.
DR RefSeq; NP_001331238.1; NM_001345162.1.
DR RefSeq; NP_001331239.1; NM_001345163.1.
DR RefSeq; NP_200395.2; NM_124966.3.
DR AlphaFoldDB; Q9LVQ5; -.
DR SMR; Q9LVQ5; -.
DR STRING; 3702.AT5G55840.1; -.
DR iPTMnet; Q9LVQ5; -.
DR PaxDb; Q9LVQ5; -.
DR PRIDE; Q9LVQ5; -.
DR ProteomicsDB; 249313; -.
DR EnsemblPlants; AT5G55840.3; AT5G55840.3; AT5G55840.
DR GeneID; 835678; -.
DR Gramene; AT5G55840.3; AT5G55840.3; AT5G55840.
DR KEGG; ath:AT5G55840; -.
DR Araport; AT5G55840; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_10_1; -.
DR InParanoid; Q9LVQ5; -.
DR OMA; CKKGRYK; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LVQ5; -.
DR PRO; PR:Q9LVQ5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LVQ5; baseline and differential.
DR Genevisible; Q9LVQ5; AT.
DR Gene3D; 1.25.40.10; -; 9.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 8.
DR Pfam; PF17177; PPR_long; 1.
DR TIGRFAMs; TIGR00756; PPR; 22.
DR PROSITE; PS51375; PPR; 27.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..1096
FT /note="Pentatricopeptide repeat-containing protein
FT At5g55840"
FT /id="PRO_0000363569"
FT REPEAT 122..156
FT /note="PPR 1"
FT REPEAT 157..191
FT /note="PPR 2"
FT REPEAT 192..226
FT /note="PPR 3"
FT REPEAT 227..261
FT /note="PPR 4"
FT REPEAT 262..296
FT /note="PPR 5"
FT REPEAT 297..331
FT /note="PPR 6"
FT REPEAT 332..366
FT /note="PPR 7"
FT REPEAT 367..401
FT /note="PPR 8"
FT REPEAT 402..436
FT /note="PPR 9"
FT REPEAT 437..471
FT /note="PPR 10"
FT REPEAT 472..506
FT /note="PPR 11"
FT REPEAT 507..541
FT /note="PPR 12"
FT REPEAT 542..576
FT /note="PPR 13"
FT REPEAT 577..607
FT /note="PPR 14"
FT REPEAT 612..646
FT /note="PPR 15"
FT REPEAT 647..681
FT /note="PPR 16"
FT REPEAT 683..717
FT /note="PPR 17"
FT REPEAT 718..752
FT /note="PPR 18"
FT REPEAT 753..787
FT /note="PPR 19"
FT REPEAT 788..822
FT /note="PPR 20"
FT REPEAT 823..857
FT /note="PPR 21"
FT REPEAT 858..892
FT /note="PPR 22"
FT REPEAT 893..927
FT /note="PPR 23"
FT REPEAT 928..962
FT /note="PPR 24"
FT REPEAT 963..997
FT /note="PPR 25"
FT REPEAT 998..1032
FT /note="PPR 26"
FT REPEAT 1033..1068
FT /note="PPR 27"
SQ SEQUENCE 1096 AA; 122499 MW; F65E78C06884B42E CRC64;
MCLTKDLNLL GSYETGFDME KSIYNILTID RWGSLNHMDY RQARLRLVHG KLALKFLKWV
VKQPGLETDH IVQLVCITTH ILVRARMYDP ARHILKELSL MSGKSSFVFG ALMTTYRLCN
SNPSVYDILI RVYLREGMIQ DSLEIFRLMG LYGFNPSVYT CNAILGSVVK SGEDVSVWSF
LKEMLKRKIC PDVATFNILI NVLCAEGSFE KSSYLMQKME KSGYAPTIVT YNTVLHWYCK
KGRFKAAIEL LDHMKSKGVD ADVCTYNMLI HDLCRSNRIA KGYLLLRDMR KRMIHPNEVT
YNTLINGFSN EGKVLIASQL LNEMLSFGLS PNHVTFNALI DGHISEGNFK EALKMFYMME
AKGLTPSEVS YGVLLDGLCK NAEFDLARGF YMRMKRNGVC VGRITYTGMI DGLCKNGFLD
EAVVLLNEMS KDGIDPDIVT YSALINGFCK VGRFKTAKEI VCRIYRVGLS PNGIIYSTLI
YNCCRMGCLK EAIRIYEAMI LEGHTRDHFT FNVLVTSLCK AGKVAEAEEF MRCMTSDGIL
PNTVSFDCLI NGYGNSGEGL KAFSVFDEMT KVGHHPTFFT YGSLLKGLCK GGHLREAEKF
LKSLHAVPAA VDTVMYNTLL TAMCKSGNLA KAVSLFGEMV QRSILPDSYT YTSLISGLCR
KGKTVIAILF AKEAEARGNV LPNKVMYTCF VDGMFKAGQW KAGIYFREQM DNLGHTPDIV
TTNAMIDGYS RMGKIEKTND LLPEMGNQNG GPNLTTYNIL LHGYSKRKDV STSFLLYRSI
ILNGILPDKL TCHSLVLGIC ESNMLEIGLK ILKAFICRGV EVDRYTFNML ISKCCANGEI
NWAFDLVKVM TSLGISLDKD TCDAMVSVLN RNHRFQESRM VLHEMSKQGI SPESRKYIGL
INGLCRVGDI KTAFVVKEEM IAHKICPPNV AESAMVRALA KCGKADEATL LLRFMLKMKL
VPTIASFTTL MHLCCKNGNV IEALELRVVM SNCGLKLDLV SYNVLITGLC AKGDMALAFE
LYEEMKGDGF LANATTYKAL IRGLLARETA FSGADIILKD LLARGFITSM SLSQDSHRNL
KMAMEKLKAL QSNKKD
