PP434_ARATH
ID PP434_ARATH Reviewed; 971 AA.
AC Q9LVD3;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 2.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g57250, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At5g57250; ORFNames=MJB24.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA96948.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB019233; BAA96948.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED96871.1; -; Genomic_DNA.
DR RefSeq; NP_001078759.1; NM_001085290.2.
DR AlphaFoldDB; Q9LVD3; -.
DR SMR; Q9LVD3; -.
DR STRING; 3702.AT5G57250.1; -.
DR PaxDb; Q9LVD3; -.
DR PRIDE; Q9LVD3; -.
DR ProteomicsDB; 249315; -.
DR EnsemblPlants; AT5G57250.1; AT5G57250.1; AT5G57250.
DR GeneID; 5008310; -.
DR Gramene; AT5G57250.1; AT5G57250.1; AT5G57250.
DR KEGG; ath:AT5G57250; -.
DR Araport; AT5G57250; -.
DR TAIR; locus:2165585; AT5G57250.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_4_1; -.
DR InParanoid; Q9LVD3; -.
DR OMA; VTSKTCY; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LVD3; -.
DR PRO; PR:Q9LVD3; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LVD3; baseline and differential.
DR Genevisible; Q9LVD3; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 8.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 4.
DR Pfam; PF13041; PPR_2; 5.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR00756; PPR; 14.
DR PROSITE; PS51375; PPR; 23.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..64
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 65..971
FT /note="Pentatricopeptide repeat-containing protein
FT At5g57250, mitochondrial"
FT /id="PRO_0000363571"
FT REPEAT 101..136
FT /note="PPR 1"
FT REPEAT 137..173
FT /note="PPR 2"
FT REPEAT 174..208
FT /note="PPR 3"
FT REPEAT 211..245
FT /note="PPR 4"
FT REPEAT 247..281
FT /note="PPR 5"
FT REPEAT 282..316
FT /note="PPR 6"
FT REPEAT 317..351
FT /note="PPR 7"
FT REPEAT 352..386
FT /note="PPR 8"
FT REPEAT 387..421
FT /note="PPR 9"
FT REPEAT 422..445
FT /note="PPR 10"
FT REPEAT 452..486
FT /note="PPR 11"
FT REPEAT 487..521
FT /note="PPR 12"
FT REPEAT 522..556
FT /note="PPR 13"
FT REPEAT 557..590
FT /note="PPR 14"
FT REPEAT 591..625
FT /note="PPR 15"
FT REPEAT 626..660
FT /note="PPR 16"
FT REPEAT 695..729
FT /note="PPR 17"
FT REPEAT 730..764
FT /note="PPR 18"
FT REPEAT 765..799
FT /note="PPR 19"
FT REPEAT 800..834
FT /note="PPR 20"
FT REPEAT 835..869
FT /note="PPR 21"
FT REPEAT 870..904
FT /note="PPR 22"
SQ SEQUENCE 971 AA; 108619 MW; E1D3878E514B3ACB CRC64;
MKLYPRTSSG LFSLQSLLKS GFSPTLNSID RFLRYLYRLQ KFNCILQFYS QLDSKQININ
HRIYSIVSWA FLNLNRYEDA EKFINIHISK ASIFPRTHML DSLIHGFSIT RDDPSKGLLI
LRDCLRNHGA FPSSLTFCSL IYRFVEKGEM DNAIEVLEMM TNKNVNYPFD NFVCSAVISG
FCKIGKPELA LGFFESAVDS GVLVPNLVTY TTLVSALCQL GKVDEVRDLV RRLEDEGFEF
DCVFYSNWIH GYFKGGALVD ALMQDREMVE KGMNRDVVSY SILIDGLSKE GNVEEALGLL
GKMIKEGVEP NLITYTAIIR GLCKMGKLEE AFVLFNRILS VGIEVDEFLY VTLIDGICRK
GNLNRAFSML GDMEQRGIQP SILTYNTVIN GLCMAGRVSE ADEVSKGVVG DVITYSTLLD
SYIKVQNIDA VLEIRRRFLE AKIPMDLVMC NILLKAFLLM GAYGEADALY RAMPEMDLTP
DTATYATMIK GYCKTGQIEE ALEMFNELRK SSVSAAVCYN RIIDALCKKG MLDTATEVLI
ELWEKGLYLD IHTSRTLLHS IHANGGDKGI LGLVYGLEQL NSDVCLGMLN DAILLLCKRG
SFEAAIEVYM IMRRKGLTVT FPSTILKTLV DNLRSLDAYL LVVNAGETTL SSMDVIDYTI
IINGLCKEGF LVKALNLCSF AKSRGVTLNT ITYNSLINGL CQQGCLVEAL RLFDSLENIG
LVPSEVTYGI LIDNLCKEGL FLDAEKLLDS MVSKGLVPNI IIYNSIVDGY CKLGQTEDAM
RVVSRKMMGR VTPDAFTVSS MIKGYCKKGD MEEALSVFTE FKDKNISADF FGFLFLIKGF
CTKGRMEEAR GLLREMLVSE SVVKLINRVD AELAESESIR GFLVELCEQG RVPQAIKILD
EISSTIYPSG KNLGSYQRLQ FLNDVNEEEI KKKDYVHDFH SLHSTVSSLC TSGKLEQANE
FVMSVLSCMP R
