ID   PP436_ARATH             Reviewed;         534 AA.
AC   Q9FGR2;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   25-MAY-2022, entry version 118.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g59600;
GN   Name=PCMP-E1; OrderedLocusNames=At5g59600; ORFNames=F2O15.13;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RA   Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL   Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9405937; DOI=10.1093/dnares/4.4.291;
RA   Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence
RT   features of the regions of 1,044,062 bp covered by thirteen physically
RT   assigned P1 clones.";
RL   DNA Res. 4:291-300(1997).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AB025604; BAB11040.1; -; Genomic_DNA.
DR   EMBL; AB006705; BAB11040.1; JOINED; Genomic_DNA.
DR   EMBL; CP002688; AED97210.1; -; Genomic_DNA.
DR   EMBL; BT023730; AAZ23922.1; -; mRNA.
DR   RefSeq; NP_200768.1; NM_125352.4.
DR   AlphaFoldDB; Q9FGR2; -.
DR   SMR; Q9FGR2; -.
DR   PaxDb; Q9FGR2; -.
DR   PRIDE; Q9FGR2; -.
DR   ProteomicsDB; 249317; -.
DR   EnsemblPlants; AT5G59600.1; AT5G59600.1; AT5G59600.
DR   GeneID; 836079; -.
DR   Gramene; AT5G59600.1; AT5G59600.1; AT5G59600.
DR   KEGG; ath:AT5G59600; -.
DR   Araport; AT5G59600; -.
DR   TAIR; locus:2148393; AT5G59600.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_1_1; -.
DR   OMA; YPNSATI; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9FGR2; -.
DR   PRO; PR:Q9FGR2; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FGR2; differential.
DR   Genevisible; Q9FGR2; AT.
DR   Gene3D; 1.25.40.10; -; 3.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 3.
DR   TIGRFAMs; TIGR00756; PPR; 5.
DR   PROSITE; PS51375; PPR; 11.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..534
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g59600"
FT                   /id="PRO_0000363573"
FT   REPEAT          50..80
FT                   /note="PPR 1"
FT   REPEAT          81..115
FT                   /note="PPR 2"
FT   REPEAT          116..150
FT                   /note="PPR 3"
FT   REPEAT          151..181
FT                   /note="PPR 4"
FT   REPEAT          182..216
FT                   /note="PPR 5"
FT   REPEAT          217..251
FT                   /note="PPR 6"
FT   REPEAT          252..286
FT                   /note="PPR 7"
FT   REPEAT          287..321
FT                   /note="PPR 8"
FT   REPEAT          322..352
FT                   /note="PPR 9"
FT   REPEAT          353..387
FT                   /note="PPR 10"
FT   REPEAT          388..418
FT                   /note="PPR 11"
FT   REPEAT          424..454
FT                   /note="PPR 12"
FT   REGION          459..534
FT                   /note="Type E motif"
SQ   SEQUENCE   534 AA;  59955 MW;  1C56013CA7C08F65 CRC64;
     MKKLTIVPSS FRLLSIGSYV ELIEANGRDR LFCRGRVLHA HLVTSGIARL TRIAAKLVTF
     YVECGKVLDA RKVFDEMPKR DISGCVVMIG ACARNGYYQE SLDFFREMYK DGLKLDAFIV
     PSLLKASRNL LDREFGKMIH CLVLKFSYES DAFIVSSLID MYSKFGEVGN ARKVFSDLGE
     QDLVVFNAMI SGYANNSQAD EALNLVKDMK LLGIKPDVIT WNALISGFSH MRNEEKVSEI
     LELMCLDGYK PDVVSWTSII SGLVHNFQNE KAFDAFKQML THGLYPNSAT IITLLPACTT
     LAYMKHGKEI HGYSVVTGLE DHGFVRSALL DMYGKCGFIS EAMILFRKTP KKTTVTFNSM
     IFCYANHGLA DKAVELFDQM EATGEKLDHL TFTAILTACS HAGLTDLGQN LFLLMQNKYR
     IVPRLEHYAC MVDLLGRAGK LVEAYEMIKA MRMEPDLFVW GALLAACRNH GNMELARIAA
     KHLAELEPEN SGNGLLLTSL YANAGSWESV VRMKKMIKKK RFRRFLGSSW VETV