PP437_ARATH
ID PP437_ARATH Reviewed; 907 AA.
AC Q9FJE6;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 110.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At5g59900;
GN OrderedLocusNames=At5g59900; ORFNames=MMN10.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9872454; DOI=10.1093/dnares/5.5.297;
RA Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence
RT features of the regions of 1,013,767 bp covered by sixteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:297-308(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB015475; BAB08358.1; -; Genomic_DNA.
DR EMBL; CP002688; AED97249.1; -; Genomic_DNA.
DR RefSeq; NP_200798.1; NM_125383.2.
DR AlphaFoldDB; Q9FJE6; -.
DR SMR; Q9FJE6; -.
DR PaxDb; Q9FJE6; -.
DR PRIDE; Q9FJE6; -.
DR ProteomicsDB; 249318; -.
DR EnsemblPlants; AT5G59900.1; AT5G59900.1; AT5G59900.
DR GeneID; 836112; -.
DR Gramene; AT5G59900.1; AT5G59900.1; AT5G59900.
DR KEGG; ath:AT5G59900; -.
DR Araport; AT5G59900; -.
DR TAIR; locus:2168078; AT5G59900.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_10_1; -.
DR InParanoid; Q9FJE6; -.
DR OMA; DNYTYRS; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9FJE6; -.
DR PRO; PR:Q9FJE6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FJE6; baseline and differential.
DR Genevisible; Q9FJE6; AT.
DR Gene3D; 1.25.40.10; -; 8.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 8.
DR TIGRFAMs; TIGR00756; PPR; 16.
DR PROSITE; PS51375; PPR; 22.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..907
FT /note="Putative pentatricopeptide repeat-containing protein
FT At5g59900"
FT /id="PRO_0000363574"
FT REPEAT 103..137
FT /note="PPR 1"
FT REPEAT 155..185
FT /note="PPR 2"
FT REPEAT 191..225
FT /note="PPR 3"
FT REPEAT 226..260
FT /note="PPR 4"
FT REPEAT 261..295
FT /note="PPR 5"
FT REPEAT 296..330
FT /note="PPR 6"
FT REPEAT 331..365
FT /note="PPR 7"
FT REPEAT 366..400
FT /note="PPR 8"
FT REPEAT 401..435
FT /note="PPR 9"
FT REPEAT 436..470
FT /note="PPR 10"
FT REPEAT 471..505
FT /note="PPR 11"
FT REPEAT 506..540
FT /note="PPR 12"
FT REPEAT 541..575
FT /note="PPR 13"
FT REPEAT 576..610
FT /note="PPR 14"
FT REPEAT 611..645
FT /note="PPR 15"
FT REPEAT 646..680
FT /note="PPR 16"
FT REPEAT 681..715
FT /note="PPR 17"
FT REPEAT 716..750
FT /note="PPR 18"
FT REPEAT 751..782
FT /note="PPR 19"
FT REPEAT 786..820
FT /note="PPR 20"
FT REPEAT 821..855
FT /note="PPR 21"
FT REPEAT 856..890
FT /note="PPR 22"
FT REGION 887..907
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 907 AA; 101633 MW; 16E24992A66CAB5D CRC64;
MKLPCTIRSI TSSHFRNSFR NVSSVIDSAQ EECRIAEDKQ FVDAVKRIVR GKRSWEIALS
SELVSRRLKT VHVEEILIGT IDDPKLGLRF FNFLGLHRGF DHSTASFCIL IHALVKANLF
WPASSLLQTL LLRALKPSDV FNVLFSCYEK CKLSSSSSFD LLIQHYVRSR RVLDGVLVFK
MMITKVSLLP EVRTLSALLH GLVKFRHFGL AMELFNDMVS VGIRPDVYIY TGVIRSLCEL
KDLSRAKEMI AHMEATGCDV NIVPYNVLID GLCKKQKVWE AVGIKKDLAG KDLKPDVVTY
CTLVYGLCKV QEFEIGLEMM DEMLCLRFSP SEAAVSSLVE GLRKRGKIEE ALNLVKRVVD
FGVSPNLFVY NALIDSLCKG RKFHEAELLF DRMGKIGLRP NDVTYSILID MFCRRGKLDT
ALSFLGEMVD TGLKLSVYPY NSLINGHCKF GDISAAEGFM AEMINKKLEP TVVTYTSLMG
GYCSKGKINK ALRLYHEMTG KGIAPSIYTF TTLLSGLFRA GLIRDAVKLF NEMAEWNVKP
NRVTYNVMIE GYCEEGDMSK AFEFLKEMTE KGIVPDTYSY RPLIHGLCLT GQASEAKVFV
DGLHKGNCEL NEICYTGLLH GFCREGKLEE ALSVCQEMVQ RGVDLDLVCY GVLIDGSLKH
KDRKLFFGLL KEMHDRGLKP DDVIYTSMID AKSKTGDFKE AFGIWDLMIN EGCVPNEVTY
TAVINGLCKA GFVNEAEVLC SKMQPVSSVP NQVTYGCFLD ILTKGEVDMQ KAVELHNAIL
KGLLANTATY NMLIRGFCRQ GRIEEASELI TRMIGDGVSP DCITYTTMIN ELCRRNDVKK
AIELWNSMTE KGIRPDRVAY NTLIHGCCVA GEMGKATELR NEMLRQGLIP NNKTSRTTTS
NDTSSKS
