PP443_ARATH
ID PP443_ARATH Reviewed; 982 AA.
AC Q9LVA2;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 112.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g62370;
GN OrderedLocusNames=At5g62370; ORFNames=MMI9.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB019235; BAA97201.1; -; Genomic_DNA.
DR EMBL; CP002688; AED97601.1; -; Genomic_DNA.
DR RefSeq; NP_201043.1; NM_125631.2.
DR AlphaFoldDB; Q9LVA2; -.
DR SMR; Q9LVA2; -.
DR iPTMnet; Q9LVA2; -.
DR PaxDb; Q9LVA2; -.
DR PRIDE; Q9LVA2; -.
DR EnsemblPlants; AT5G62370.1; AT5G62370.1; AT5G62370.
DR GeneID; 836358; -.
DR Gramene; AT5G62370.1; AT5G62370.1; AT5G62370.
DR KEGG; ath:AT5G62370; -.
DR Araport; AT5G62370; -.
DR TAIR; locus:2167898; AT5G62370.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_7_2_1; -.
DR InParanoid; Q9LVA2; -.
DR OMA; ISGFCWA; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LVA2; -.
DR PRO; PR:Q9LVA2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LVA2; baseline and differential.
DR Gene3D; 1.25.40.10; -; 7.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 5.
DR Pfam; PF13812; PPR_3; 2.
DR TIGRFAMs; TIGR00756; PPR; 11.
DR PROSITE; PS51375; PPR; 23.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..982
FT /note="Pentatricopeptide repeat-containing protein
FT At5g62370"
FT /id="PRO_0000363580"
FT REPEAT 94..129
FT /note="PPR 1"
FT REPEAT 130..164
FT /note="PPR 2"
FT REPEAT 165..199
FT /note="PPR 3"
FT REPEAT 200..234
FT /note="PPR 4"
FT REPEAT 236..270
FT /note="PPR 5"
FT REPEAT 271..305
FT /note="PPR 6"
FT REPEAT 306..340
FT /note="PPR 7"
FT REPEAT 341..376
FT /note="PPR 8"
FT REPEAT 377..411
FT /note="PPR 9"
FT REPEAT 412..446
FT /note="PPR 10"
FT REPEAT 476..510
FT /note="PPR 11"
FT REPEAT 511..545
FT /note="PPR 12"
FT REPEAT 546..580
FT /note="PPR 13"
FT REPEAT 581..615
FT /note="PPR 14"
FT REPEAT 616..650
FT /note="PPR 15"
FT REPEAT 651..685
FT /note="PPR 16"
FT REPEAT 686..720
FT /note="PPR 17"
FT REPEAT 721..755
FT /note="PPR 18"
FT REPEAT 759..789
FT /note="PPR 19"
FT REPEAT 793..827
FT /note="PPR 20"
FT REPEAT 828..858
FT /note="PPR 21"
FT REPEAT 860..894
FT /note="PPR 22"
FT REPEAT 895..929
FT /note="PPR 23"
FT REPEAT 930..964
FT /note="PPR 24"
SQ SEQUENCE 982 AA; 110268 MW; B61BFBA8FD0AD14B CRC64;
MLKAKALCYR FFKSRKATTC ALSSELFPST SAAVFSAASG DHRSRCLSLI VKLGRRGLLD
SAREVIRRVI DGSSSISEAA LVADFAVDNG IELDSSCYGA LIRKLTEMGQ PGVAETFYNQ
RVIGNGIVPD SSVLDSMVFC LVKLRRFDEA RAHLDRIIAS GYAPSRNSSS LVVDELCNQD
RFLEAFHCFE QVKERGSGLW LWCCKRLFKG LCGHGHLNEA IGMLDTLCGM TRMPLPVNLY
KSLFYCFCKR GCAAEAEALF DHMEVDGYYV DKVMYTCLMK EYCKDNNMTM AMRLYLRMVE
RSFELDPCIF NTLIHGFMKL GMLDKGRVMF SQMIKKGVQS NVFTYHIMIG SYCKEGNVDY
ALRLFVNNTG SEDISRNVHC YTNLIFGFYK KGGMDKAVDL LMRMLDNGIV PDHITYFVLL
KMLPKCHELK YAMVILQSIL DNGCGINPPV IDDLGNIEVK VESLLGEIAR KDANLAAVGL
AVVTTALCSQ RNYIAALSRI EKMVNLGCTP LPFSYNSVIK CLFQENIIED LASLVNIIQE
LDFVPDVDTY LIVVNELCKK NDRDAAFAII DAMEELGLRP TVAIYSSIIG SLGKQGRVVE
AEETFAKMLE SGIQPDEIAY MIMINTYARN GRIDEANELV EEVVKHFLRP SSFTYTVLIS
GFVKMGMMEK GCQYLDKMLE DGLSPNVVLY TALIGHFLKK GDFKFSFTLF GLMGENDIKH
DHIAYITLLS GLWRAMARKK KRQVIVEPGK EKLLQRLIRT KPLVSIPSSL GNYGSKSFAM
EVIGKVKKSI IPNLYLHNTI ITGYCAAGRL DEAYNHLESM QKEGIVPNLV TYTILMKSHI
EAGDIESAID LFEGTNCEPD QVMYSTLLKG LCDFKRPLDA LALMLEMQKS GINPNKDSYE
KLLQCLCYSR LTMEAVKVVK DMAALDIWPR SINHTWLIYI LCEEKKLREA RALFAIMVQS
GRSLLNCTKP GLLKMLNQNQ QL
