PP444_ARATH
ID PP444_ARATH Reviewed; 730 AA.
AC Q9FMF6;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 110.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g64320, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At5g64320; ORFNames=MSJ1.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB008268; BAB09863.1; -; Genomic_DNA.
DR EMBL; CP002688; AED97869.1; -; Genomic_DNA.
DR RefSeq; NP_201237.1; NM_125828.3.
DR AlphaFoldDB; Q9FMF6; -.
DR SMR; Q9FMF6; -.
DR STRING; 3702.AT5G64320.1; -.
DR PaxDb; Q9FMF6; -.
DR PRIDE; Q9FMF6; -.
DR ProteomicsDB; 249325; -.
DR EnsemblPlants; AT5G64320.1; AT5G64320.1; AT5G64320.
DR GeneID; 836553; -.
DR Gramene; AT5G64320.1; AT5G64320.1; AT5G64320.
DR KEGG; ath:AT5G64320; -.
DR Araport; AT5G64320; -.
DR TAIR; locus:2173403; AT5G64320.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; Q9FMF6; -.
DR OMA; DVIHGLC; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9FMF6; -.
DR PRO; PR:Q9FMF6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FMF6; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR GO; GO:0032543; P:mitochondrial translation; IMP:TAIR.
DR Gene3D; 1.25.40.10; -; 7.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR TIGRFAMs; TIGR00756; PPR; 14.
DR PROSITE; PS51375; PPR; 16.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..18
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 19..730
FT /note="Pentatricopeptide repeat-containing protein
FT At5g64320, mitochondrial"
FT /id="PRO_0000363581"
FT REPEAT 110..144
FT /note="PPR 1"
FT REPEAT 145..175
FT /note="PPR 2"
FT REPEAT 181..215
FT /note="PPR 3"
FT REPEAT 216..250
FT /note="PPR 4"
FT REPEAT 251..285
FT /note="PPR 5"
FT REPEAT 286..320
FT /note="PPR 6"
FT REPEAT 321..351
FT /note="PPR 7"
FT REPEAT 352..387
FT /note="PPR 8"
FT REPEAT 388..422
FT /note="PPR 9"
FT REPEAT 423..457
FT /note="PPR 10"
FT REPEAT 458..492
FT /note="PPR 11"
FT REPEAT 493..527
FT /note="PPR 12"
FT REPEAT 528..562
FT /note="PPR 13"
FT REPEAT 563..597
FT /note="PPR 14"
FT REPEAT 598..632
FT /note="PPR 15"
FT REPEAT 633..667
FT /note="PPR 16"
FT REPEAT 668..702
FT /note="PPR 17"
SQ SEQUENCE 730 AA; 81958 MW; 5738CB6CFB18DCCD CRC64;
MVMLARSKLA LDVSRRSQSL QRICYYASLS SRFSGGGGDD GGGSSPEIGG TDSANEWEKL
LKPFDLDSLR NSFHKITPFQ LYKLLELPLN VSTSMELFSW TGSQNGYRHS FDVYQVLIGK
LGANGEFKTI DRLLIQMKDE GIVFKESLFI SIMRDYDKAG FPGQTTRLML EMRNVYSCEP
TFKSYNVVLE ILVSGNCHKV AANVFYDMLS RKIPPTLFTF GVVMKAFCAV NEIDSALSLL
RDMTKHGCVP NSVIYQTLIH SLSKCNRVNE ALQLLEEMFL MGCVPDAETF NDVILGLCKF
DRINEAAKMV NRMLIRGFAP DDITYGYLMN GLCKIGRVDA AKDLFYRIPK PEIVIFNTLI
HGFVTHGRLD DAKAVLSDMV TSYGIVPDVC TYNSLIYGYW KEGLVGLALE VLHDMRNKGC
KPNVYSYTIL VDGFCKLGKI DEAYNVLNEM SADGLKPNTV GFNCLISAFC KEHRIPEAVE
IFREMPRKGC KPDVYTFNSL ISGLCEVDEI KHALWLLRDM ISEGVVANTV TYNTLINAFL
RRGEIKEARK LVNEMVFQGS PLDEITYNSL IKGLCRAGEV DKARSLFEKM LRDGHAPSNI
SCNILINGLC RSGMVEEAVE FQKEMVLRGS TPDIVTFNSL INGLCRAGRI EDGLTMFRKL
QAEGIPPDTV TFNTLMSWLC KGGFVYDACL LLDEGIEDGF VPNHRTWSIL LQSIIPQETL
DRRRFYNAAF