PP445_ARATH
ID PP445_ARATH Reviewed; 915 AA.
AC Q9LSL9;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 108.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g65560;
GN OrderedLocusNames=At5g65560; ORFNames=K21L13.7;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB026639; BAA98175.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98071.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70230.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70231.1; -; Genomic_DNA.
DR EMBL; AK228697; BAF00601.1; -; mRNA.
DR RefSeq; NP_001331859.1; NM_001345697.1.
DR RefSeq; NP_001331860.1; NM_001345698.1.
DR RefSeq; NP_201359.1; NM_125954.6.
DR AlphaFoldDB; Q9LSL9; -.
DR SMR; Q9LSL9; -.
DR PaxDb; Q9LSL9; -.
DR PRIDE; Q9LSL9; -.
DR ProteomicsDB; 249326; -.
DR EnsemblPlants; AT5G65560.1; AT5G65560.1; AT5G65560.
DR EnsemblPlants; AT5G65560.2; AT5G65560.2; AT5G65560.
DR EnsemblPlants; AT5G65560.3; AT5G65560.3; AT5G65560.
DR GeneID; 836682; -.
DR Gramene; AT5G65560.1; AT5G65560.1; AT5G65560.
DR Gramene; AT5G65560.2; AT5G65560.2; AT5G65560.
DR Gramene; AT5G65560.3; AT5G65560.3; AT5G65560.
DR KEGG; ath:AT5G65560; -.
DR Araport; AT5G65560; -.
DR TAIR; locus:2155730; AT5G65560.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_3_1; -.
DR InParanoid; Q9LSL9; -.
DR OMA; CCISSQT; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; Q9LSL9; -.
DR PRO; PR:Q9LSL9; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LSL9; baseline and differential.
DR Genevisible; Q9LSL9; AT.
DR Gene3D; 1.25.40.10; -; 9.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 7.
DR Pfam; PF13812; PPR_3; 1.
DR TIGRFAMs; TIGR00756; PPR; 17.
DR PROSITE; PS51375; PPR; 20.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..915
FT /note="Pentatricopeptide repeat-containing protein
FT At5g65560"
FT /id="PRO_0000363582"
FT REPEAT 182..216
FT /note="PPR 1"
FT REPEAT 217..251
FT /note="PPR 2"
FT REPEAT 252..286
FT /note="PPR 3"
FT REPEAT 287..321
FT /note="PPR 4"
FT REPEAT 322..356
FT /note="PPR 5"
FT REPEAT 357..391
FT /note="PPR 6"
FT REPEAT 392..426
FT /note="PPR 7"
FT REPEAT 427..460
FT /note="PPR 8"
FT REPEAT 461..495
FT /note="PPR 9"
FT REPEAT 496..530
FT /note="PPR 10"
FT REPEAT 531..565
FT /note="PPR 11"
FT REPEAT 566..600
FT /note="PPR 12"
FT REPEAT 601..635
FT /note="PPR 13"
FT REPEAT 636..670
FT /note="PPR 14"
FT REPEAT 671..705
FT /note="PPR 15"
FT REPEAT 724..758
FT /note="PPR 16"
FT REPEAT 759..794
FT /note="PPR 17"
FT REPEAT 795..829
FT /note="PPR 18"
FT REPEAT 830..864
FT /note="PPR 19"
FT REPEAT 865..899
FT /note="PPR 20"
SQ SEQUENCE 915 AA; 103538 MW; CD5AD7AF18684E48 CRC64;
MIRRIQPRCN SGLTGSVSAF EVLKKKFSTD VTVPSPVTRR QFCSVSPLLR NLPEEESDSM
SVPHRLLSIL SKPNWHKSPS LKSMVSAISP SHVSSLFSLD LDPKTALNFS HWISQNPRYK
HSVYSYASLL TLLINNGYVG VVFKIRLLMI KSCDSVGDAL YVLDLCRKMN KDERFELKYK
LIIGCYNTLL NSLARFGLVD EMKQVYMEML EDKVCPNIYT YNKMVNGYCK LGNVEEANQY
VSKIVEAGLD PDFFTYTSLI MGYCQRKDLD SAFKVFNEMP LKGCRRNEVA YTHLIHGLCV
ARRIDEAMDL FVKMKDDECF PTVRTYTVLI KSLCGSERKS EALNLVKEME ETGIKPNIHT
YTVLIDSLCS QCKFEKAREL LGQMLEKGLM PNVITYNALI NGYCKRGMIE DAVDVVELME
SRKLSPNTRT YNELIKGYCK SNVHKAMGVL NKMLERKVLP DVVTYNSLID GQCRSGNFDS
AYRLLSLMND RGLVPDQWTY TSMIDSLCKS KRVEEACDLF DSLEQKGVNP NVVMYTALID
GYCKAGKVDE AHLMLEKMLS KNCLPNSLTF NALIHGLCAD GKLKEATLLE EKMVKIGLQP
TVSTDTILIH RLLKDGDFDH AYSRFQQMLS SGTKPDAHTY TTFIQTYCRE GRLLDAEDMM
AKMRENGVSP DLFTYSSLIK GYGDLGQTNF AFDVLKRMRD TGCEPSQHTF LSLIKHLLEM
KYGKQKGSEP ELCAMSNMME FDTVVELLEK MVEHSVTPNA KSYEKLILGI CEVGNLRVAE
KVFDHMQRNE GISPSELVFN ALLSCCCKLK KHNEAAKVVD DMICVGHLPQ LESCKVLICG
LYKKGEKERG TSVFQNLLQC GYYEDELAWK IIIDGVGKQG LVEAFYELFN VMEKNGCKFS
SQTYSLLIEG PPDST
