ID   PP449_ARATH             Reviewed;         620 AA.
AC   Q9FJY7;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 113.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g66520;
GN   Name=PCMP-H61; OrderedLocusNames=At5g66520; ORFNames=K1F13.18;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA   Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT   features of the regions of 1,367,185 bp covered by 19 physically assigned
RT   P1 and TAC clones.";
RL   DNA Res. 5:203-216(1998).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=10809006; DOI=10.1023/a:1006352315928;
RA   Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT   "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT   unique to plants.";
RL   Plant Mol. Biol. 42:603-613(2000).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AB013389; BAB10928.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED98224.1; -; Genomic_DNA.
DR   RefSeq; NP_201453.1; NM_126050.2.
DR   AlphaFoldDB; Q9FJY7; -.
DR   SMR; Q9FJY7; -.
DR   STRING; 3702.AT5G66520.1; -.
DR   PaxDb; Q9FJY7; -.
DR   PRIDE; Q9FJY7; -.
DR   ProteomicsDB; 249330; -.
DR   EnsemblPlants; AT5G66520.1; AT5G66520.1; AT5G66520.
DR   GeneID; 836784; -.
DR   Gramene; AT5G66520.1; AT5G66520.1; AT5G66520.
DR   KEGG; ath:AT5G66520; -.
DR   Araport; AT5G66520; -.
DR   TAIR; locus:2154855; AT5G66520.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_37_2_1; -.
DR   InParanoid; Q9FJY7; -.
DR   OMA; HNSYTFP; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9FJY7; -.
DR   PRO; PR:Q9FJY7; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FJY7; differential.
DR   Genevisible; Q9FJY7; AT.
DR   GO; GO:0009507; C:chloroplast; IEA:GOC.
DR   GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:1900865; P:chloroplast RNA modification; IMP:TAIR.
DR   GO; GO:0016554; P:cytidine to uridine editing; IMP:TAIR.
DR   Gene3D; 1.25.40.10; -; 3.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 2.
DR   TIGRFAMs; TIGR00756; PPR; 4.
DR   PROSITE; PS51375; PPR; 10.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..620
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g66520"
FT                   /id="PRO_0000363586"
FT   REPEAT          79..113
FT                   /note="PPR 1"
FT   REPEAT          114..148
FT                   /note="PPR 2"
FT   REPEAT          149..179
FT                   /note="PPR 3"
FT   REPEAT          180..210
FT                   /note="PPR 4"
FT   REPEAT          211..245
FT                   /note="PPR 5"
FT   REPEAT          246..280
FT                   /note="PPR 6"
FT   REPEAT          281..311
FT                   /note="PPR 7"
FT   REPEAT          312..346
FT                   /note="PPR 8"
FT   REPEAT          347..382
FT                   /note="PPR 9"
FT   REPEAT          383..413
FT                   /note="PPR 10"
FT   REGION          418..493
FT                   /note="Type E motif"
FT   REGION          494..524
FT                   /note="Type E(+) motif"
FT   REGION          525..620
FT                   /note="Type DYW motif"
SQ   SEQUENCE   620 AA;  70716 MW;  F7D52894C9B889EC CRC64;
     MNVISCSFSL EHNLYETMSC LQRCSKQEEL KQIHARMLKT GLMQDSYAIT KFLSFCISST
     SSDFLPYAQI VFDGFDRPDT FLWNLMIRGF SCSDEPERSL LLYQRMLCSS APHNAYTFPS
     LLKACSNLSA FEETTQIHAQ ITKLGYENDV YAVNSLINSY AVTGNFKLAH LLFDRIPEPD
     DVSWNSVIKG YVKAGKMDIA LTLFRKMAEK NAISWTTMIS GYVQADMNKE ALQLFHEMQN
     SDVEPDNVSL ANALSACAQL GALEQGKWIH SYLNKTRIRM DSVLGCVLID MYAKCGEMEE
     ALEVFKNIKK KSVQAWTALI SGYAYHGHGR EAISKFMEMQ KMGIKPNVIT FTAVLTACSY
     TGLVEEGKLI FYSMERDYNL KPTIEHYGCI VDLLGRAGLL DEAKRFIQEM PLKPNAVIWG
     ALLKACRIHK NIELGEEIGE ILIAIDPYHG GRYVHKANIH AMDKKWDKAA ETRRLMKEQG
     VAKVPGCSTI SLEGTTHEFL AGDRSHPEIE KIQSKWRIMR RKLEENGYVP ELEEMLLDLV
     DDDEREAIVH QHSEKLAITY GLIKTKPGTI IRIMKNLRVC KDCHKVTKLI SKIYKRDIVM
     RDRTRFHHFR DGKCSCGDYW