PP450_ARATH
ID PP450_ARATH Reviewed; 661 AA.
AC B3H4P1;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 22-JUL-2008, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g66631;
GN OrderedLocusNames=At5g66631; ORFNames=MSN2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AB018119; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED98242.1; -; Genomic_DNA.
DR RefSeq; NP_001119513.1; NM_001126041.2.
DR AlphaFoldDB; B3H4P1; -.
DR SMR; B3H4P1; -.
DR BioGRID; 926961; 1.
DR STRING; 3702.AT5G66631.1; -.
DR iPTMnet; B3H4P1; -.
DR PaxDb; B3H4P1; -.
DR PRIDE; B3H4P1; -.
DR ProteomicsDB; 249331; -.
DR EnsemblPlants; AT5G66631.1; AT5G66631.1; AT5G66631.
DR GeneID; 6240924; -.
DR Gramene; AT5G66631.1; AT5G66631.1; AT5G66631.
DR KEGG; ath:AT5G66631; -.
DR Araport; AT5G66631; -.
DR TAIR; locus:4515103769; AT5G66631.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_028150_1_0_1; -.
DR InParanoid; B3H4P1; -.
DR OMA; LMHHFAL; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; B3H4P1; -.
DR PRO; PR:B3H4P1; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; B3H4P1; baseline and differential.
DR Gene3D; 1.25.40.10; -; 3.
DR InterPro; IPR044175; At5g66631-like.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR47913; PTHR47913; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 1.
DR TIGRFAMs; TIGR00756; PPR; 1.
DR PROSITE; PS51375; PPR; 8.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..661
FT /note="Pentatricopeptide repeat-containing protein
FT At5g66631"
FT /id="PRO_0000363587"
FT REPEAT 139..173
FT /note="PPR 1"
FT REPEAT 176..210
FT /note="PPR 2"
FT REPEAT 211..245
FT /note="PPR 3"
FT REPEAT 246..280
FT /note="PPR 4"
FT REPEAT 410..444
FT /note="PPR 5"
FT REPEAT 445..475
FT /note="PPR 6"
FT REPEAT 484..518
FT /note="PPR 7"
FT REPEAT 519..553
FT /note="PPR 8"
FT REPEAT 554..588
FT /note="PPR 9"
SQ SEQUENCE 661 AA; 76174 MW; 7BD11733C5CB138E CRC64;
MFSIIFSNPV KPFNSVIIHQ IRFFSRDPFP NKVQHYLYRA NLIDSIRLSL RSPTTSDRTL
ASLLNHRLLD SFVVKNALRS SPSVSSAWSI FKTLSHKSPR FSFETETLHA FATVLAKFQR
SSELNSLIGV VNAWKFRNVH FSFMNLLNLY ATAGDFDSVL KTWDEYRCSG EEKKGCTESY
NIVMQVYMTL GKDSEAVQTF DQIINEGGIP NSRTFTIMIE HLVKLGNLDA AMKIFETLPL
MRITRTLKHY SVLVEAFVDA QRFDEVKTLI AEMKSDGKFP SRRMLEPLKR MREAGFEHET
EEFLREMLPD ERIKDISMYS MDNPSDSEDE GDEYKDDVNE AQVKLKPWLD PKALATSLKK
WSSDAVTALE EANFVWTNLL VCKMLRNFRA PETAWSFFCW VAIQPGFTHD AYTIERMMAM
LARNGQVELV DKLISKVRIE GIKLPFSTIR LIIDLYGISK KPEAAIKVFN EDRTLCGSIS
DFNLMLLYSS LLRTLTKCKR NAEALETLED MMLTGVSPDI QTFSGLMYHF ALQGEIQTVE
RLFSMVRQIG LEPDPYMLKL LVQAYCRCER SVLAYRVFQD MKDSNLMPDR ETKELLVKSL
WREEKRKEAA AVEESYEEEN DNKNSSNVLR LALKGHVWTI SSTDISRVYN LYRDCVLKTS
T