ATB_ARATH
ID ATB_ARATH Reviewed; 607 AA.
AC Q9ZWC6; Q9ARM4; Q9ARM5;
DT 23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 132.
DE RecName: Full=F-box protein At-B;
GN Name=ATB; OrderedLocusNames=At1g55590; ORFNames=F20N2.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 7-607.
RX PubMed=11283350; DOI=10.2307/3871354;
RA Rossberg M., Theres K., Acarkan A., Herrero R., Schmitt T., Schumacher K.,
RA Schmitz G., Schmidt R.;
RT "Comparative sequence analysis reveals extensive microcolinearity in the
RT lateral suppressor regions of the tomato, Arabidopsis, and Capsella
RT genomes.";
RL Plant Cell 13:979-988(2001).
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DR EMBL; AC002328; AAF79512.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33269.1; -; Genomic_DNA.
DR EMBL; AY102102; AAM26672.1; -; mRNA.
DR EMBL; BT001062; AAN46816.1; -; mRNA.
DR EMBL; AJ303346; CAC36384.1; -; mRNA.
DR EMBL; AJ303347; CAC36385.1; -; mRNA.
DR PIR; E96598; E96598.
DR RefSeq; NP_175955.1; NM_104435.3.
DR AlphaFoldDB; Q9ZWC6; -.
DR SMR; Q9ZWC6; -.
DR IntAct; Q9ZWC6; 1.
DR STRING; 3702.AT1G55590.1; -.
DR PaxDb; Q9ZWC6; -.
DR PRIDE; Q9ZWC6; -.
DR ProteomicsDB; 240982; -.
DR EnsemblPlants; AT1G55590.1; AT1G55590.1; AT1G55590.
DR GeneID; 842008; -.
DR Gramene; AT1G55590.1; AT1G55590.1; AT1G55590.
DR KEGG; ath:AT1G55590; -.
DR Araport; AT1G55590; -.
DR TAIR; locus:2020477; AT1G55590.
DR eggNOG; KOG1947; Eukaryota.
DR HOGENOM; CLU_036665_0_0_1; -.
DR InParanoid; Q9ZWC6; -.
DR OMA; DGWQFHR; -.
DR OrthoDB; 1282076at2759; -.
DR PhylomeDB; Q9ZWC6; -.
DR PRO; PR:Q9ZWC6; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9ZWC6; baseline and differential.
DR Genevisible; Q9ZWC6; AT.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 3.80.10.10; -; 4.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF13516; LRR_6; 1.
DR SMART; SM00367; LRR_CC; 9.
PE 2: Evidence at transcript level;
KW Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..607
FT /note="F-box protein At-B"
FT /id="PRO_0000272204"
FT DOMAIN 9..47
FT /note="F-box"
FT REPEAT 51..76
FT /note="LRR 1"
FT REPEAT 77..99
FT /note="LRR 2"
FT REPEAT 100..125
FT /note="LRR 3"
FT REPEAT 130..155
FT /note="LRR 4"
FT REPEAT 228..253
FT /note="LRR 5"
FT REPEAT 262..286
FT /note="LRR 6"
FT REPEAT 295..320
FT /note="LRR 7"
FT REPEAT 321..346
FT /note="LRR 8"
FT REPEAT 347..372
FT /note="LRR 9"
FT REPEAT 373..397
FT /note="LRR 10"
FT REPEAT 398..422
FT /note="LRR 11"
FT REPEAT 424..447
FT /note="LRR 12"
FT REPEAT 448..477
FT /note="LRR 13"
FT REPEAT 478..503
FT /note="LRR 14"
FT REPEAT 504..536
FT /note="LRR 15"
FT REPEAT 537..563
FT /note="LRR 16"
SQ SEQUENCE 607 AA; 66260 MW; FC213BC291058FAE CRC64;
MEEVTRSVLA EEILKRLDLE NLCSVACVST TLRSAVVSGV LPSLTSLDLS VFSPDDETLN
HVLRGCIGLS SLTLNCLRLN AASVRGVLGP HLRELHLLRC SLLSSTVLTY IGTLCPNLRV
LTLEMADLDS PDVFQSNLTQ MLNGCPYLES LQLNIRGILV DATAFQSVRF SLPETLKALR
LQPLLESEAI LLMNRFKVTG TYLSQPDYNS ALLSPSPSFT LQSLSLVLDL ISDRLIIAIT
GSLPQLVKLD LEDRPEKEPF PDNDLTYTGL QALGFCQQLT SLSLVRTCYN RKISFKRIND
MGIFLLSEAC KGLESVRLGG FPKVSDAGFA SLLHSCRNLK KFEVRGAFLL SDLAFHDVTG
SSCSLQEVRL STCPLITSEA VKKLGLCGNL EVLDLGSCKS ISDSCLNSVS ALRKLTSLNL
AGADVTDSGM LALGKSDVPI TQLSLRGCRR VSDRGISYLL NNEGTISKTL STLDLGHMPG
ISDRAIHTIT HCCKALTELS IRSCFHVTDS SIESLATWER QAEGGSKQLR KLNVHNCVSL
TTGALRWLSK PSFAGLHWLG MGQTRFAGRK ETVTAMICGQ RPWLTLCFDG CELGCSDGWE
FHTPQRH