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ATB_ARATH
ID   ATB_ARATH               Reviewed;         607 AA.
AC   Q9ZWC6; Q9ARM4; Q9ARM5;
DT   23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1999, sequence version 1.
DT   03-AUG-2022, entry version 132.
DE   RecName: Full=F-box protein At-B;
GN   Name=ATB; OrderedLocusNames=At1g55590; ORFNames=F20N2.2;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 7-607.
RX   PubMed=11283350; DOI=10.2307/3871354;
RA   Rossberg M., Theres K., Acarkan A., Herrero R., Schmitt T., Schumacher K.,
RA   Schmitz G., Schmidt R.;
RT   "Comparative sequence analysis reveals extensive microcolinearity in the
RT   lateral suppressor regions of the tomato, Arabidopsis, and Capsella
RT   genomes.";
RL   Plant Cell 13:979-988(2001).
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DR   EMBL; AC002328; AAF79512.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE33269.1; -; Genomic_DNA.
DR   EMBL; AY102102; AAM26672.1; -; mRNA.
DR   EMBL; BT001062; AAN46816.1; -; mRNA.
DR   EMBL; AJ303346; CAC36384.1; -; mRNA.
DR   EMBL; AJ303347; CAC36385.1; -; mRNA.
DR   PIR; E96598; E96598.
DR   RefSeq; NP_175955.1; NM_104435.3.
DR   AlphaFoldDB; Q9ZWC6; -.
DR   SMR; Q9ZWC6; -.
DR   IntAct; Q9ZWC6; 1.
DR   STRING; 3702.AT1G55590.1; -.
DR   PaxDb; Q9ZWC6; -.
DR   PRIDE; Q9ZWC6; -.
DR   ProteomicsDB; 240982; -.
DR   EnsemblPlants; AT1G55590.1; AT1G55590.1; AT1G55590.
DR   GeneID; 842008; -.
DR   Gramene; AT1G55590.1; AT1G55590.1; AT1G55590.
DR   KEGG; ath:AT1G55590; -.
DR   Araport; AT1G55590; -.
DR   TAIR; locus:2020477; AT1G55590.
DR   eggNOG; KOG1947; Eukaryota.
DR   HOGENOM; CLU_036665_0_0_1; -.
DR   InParanoid; Q9ZWC6; -.
DR   OMA; DGWQFHR; -.
DR   OrthoDB; 1282076at2759; -.
DR   PhylomeDB; Q9ZWC6; -.
DR   PRO; PR:Q9ZWC6; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9ZWC6; baseline and differential.
DR   Genevisible; Q9ZWC6; AT.
DR   GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR   GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   Gene3D; 3.80.10.10; -; 4.
DR   InterPro; IPR001810; F-box_dom.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   Pfam; PF00646; F-box; 1.
DR   Pfam; PF13516; LRR_6; 1.
DR   SMART; SM00367; LRR_CC; 9.
PE   2: Evidence at transcript level;
KW   Leucine-rich repeat; Reference proteome; Repeat.
FT   CHAIN           1..607
FT                   /note="F-box protein At-B"
FT                   /id="PRO_0000272204"
FT   DOMAIN          9..47
FT                   /note="F-box"
FT   REPEAT          51..76
FT                   /note="LRR 1"
FT   REPEAT          77..99
FT                   /note="LRR 2"
FT   REPEAT          100..125
FT                   /note="LRR 3"
FT   REPEAT          130..155
FT                   /note="LRR 4"
FT   REPEAT          228..253
FT                   /note="LRR 5"
FT   REPEAT          262..286
FT                   /note="LRR 6"
FT   REPEAT          295..320
FT                   /note="LRR 7"
FT   REPEAT          321..346
FT                   /note="LRR 8"
FT   REPEAT          347..372
FT                   /note="LRR 9"
FT   REPEAT          373..397
FT                   /note="LRR 10"
FT   REPEAT          398..422
FT                   /note="LRR 11"
FT   REPEAT          424..447
FT                   /note="LRR 12"
FT   REPEAT          448..477
FT                   /note="LRR 13"
FT   REPEAT          478..503
FT                   /note="LRR 14"
FT   REPEAT          504..536
FT                   /note="LRR 15"
FT   REPEAT          537..563
FT                   /note="LRR 16"
SQ   SEQUENCE   607 AA;  66260 MW;  FC213BC291058FAE CRC64;
     MEEVTRSVLA EEILKRLDLE NLCSVACVST TLRSAVVSGV LPSLTSLDLS VFSPDDETLN
     HVLRGCIGLS SLTLNCLRLN AASVRGVLGP HLRELHLLRC SLLSSTVLTY IGTLCPNLRV
     LTLEMADLDS PDVFQSNLTQ MLNGCPYLES LQLNIRGILV DATAFQSVRF SLPETLKALR
     LQPLLESEAI LLMNRFKVTG TYLSQPDYNS ALLSPSPSFT LQSLSLVLDL ISDRLIIAIT
     GSLPQLVKLD LEDRPEKEPF PDNDLTYTGL QALGFCQQLT SLSLVRTCYN RKISFKRIND
     MGIFLLSEAC KGLESVRLGG FPKVSDAGFA SLLHSCRNLK KFEVRGAFLL SDLAFHDVTG
     SSCSLQEVRL STCPLITSEA VKKLGLCGNL EVLDLGSCKS ISDSCLNSVS ALRKLTSLNL
     AGADVTDSGM LALGKSDVPI TQLSLRGCRR VSDRGISYLL NNEGTISKTL STLDLGHMPG
     ISDRAIHTIT HCCKALTELS IRSCFHVTDS SIESLATWER QAEGGSKQLR KLNVHNCVSL
     TTGALRWLSK PSFAGLHWLG MGQTRFAGRK ETVTAMICGQ RPWLTLCFDG CELGCSDGWE
     FHTPQRH
 
 
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