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PPA6_HUMAN
ID   PPA6_HUMAN              Reviewed;         428 AA.
AC   Q9NPH0; Q59G61; Q5T490; Q6IAQ3; Q7LG81; Q9UIG6; X5D289;
DT   21-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT   28-MAR-2018, sequence version 3.
DT   03-AUG-2022, entry version 169.
DE   RecName: Full=Lysophosphatidic acid phosphatase type 6;
DE            EC=3.1.3.2 {ECO:0000269|PubMed:10506173, ECO:0000269|PubMed:23807634};
DE   AltName: Full=Acid phosphatase 6, lysophosphatidic;
DE   AltName: Full=Acid phosphatase-like protein 1;
DE   AltName: Full=PACPL1;
DE   Flags: Precursor;
GN   Name=ACP6; Synonyms=ACPL1, LPAP; ORFNames=UNQ205/PRO231;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, TISSUE SPECIFICITY,
RP   SUBCELLULAR LOCATION, MUTAGENESIS OF HIS-59, INDUCTION, CATALYTIC ACTIVITY,
RP   AND SUBSTRATE SPECIFICITY.
RC   TISSUE=Brain;
RX   PubMed=10506173; DOI=10.1074/jbc.274.41.29172;
RA   Hiroyama M., Takenawa T.;
RT   "Isolation of a cDNA encoding human lysophosphatidic acid phosphatase that
RT   is involved in the regulation of mitochondrial lipid biosynthesis.";
RL   J. Biol. Chem. 274:29172-29180(1999).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND TISSUE SPECIFICITY.
RX   PubMed=12010880; DOI=10.1136/gut.50.6.790;
RA   Takayama I., Daigo Y., Ward S.M., Sanders K.M., Walker R.L., Horowitz B.,
RA   Yamanaka T., Fujino M.A.;
RT   "Novel human and mouse genes encoding an acid phosphatase family member and
RT   its downregulation in W/W(V) mouse jejunum.";
RL   Gut 50:790-796(2002).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
RC   TISSUE=Brain;
RX   PubMed=24722188; DOI=10.1038/ncomms4650;
RA   Corominas R., Yang X., Lin G.N., Kang S., Shen Y., Ghamsari L., Broly M.,
RA   Rodriguez M., Tam S., Wanamaker S.A., Fan C., Yi S., Tasan M., Lemmens I.,
RA   Kuang X., Zhao N., Malhotra D., Michaelson J.J., Vacic V., Calderwood M.A.,
RA   Roth F.P., Tavernier J., Horvath S., Salehi-Ashtiani K., Korkin D.,
RA   Sebat J., Hill D.E., Hao T., Vidal M., Iakoucheva L.M.;
RT   "Protein interaction network of alternatively spliced isoforms from brain
RT   links genetic risk factors for autism.";
RL   Nat. Commun. 5:3650-3650(2014).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RX   PubMed=12975309; DOI=10.1101/gr.1293003;
RA   Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J.,
RA   Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P.,
RA   Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E., Heldens S., Huang A.,
RA   Kim H.S., Klimowski L., Jin Y., Johnson S., Lee J., Lewis L., Liao D.,
RA   Mark M.R., Robbie E., Sanchez C., Schoenfeld J., Seshagiri S., Simmons L.,
RA   Singh J., Smith V., Stinson J., Vagts A., Vandlen R.L., Watanabe C.,
RA   Wieand D., Woods K., Xie M.-H., Yansura D.G., Yi S., Yu G., Yuan J.,
RA   Zhang M., Zhang Z., Goddard A.D., Wood W.I., Godowski P.J., Gray A.M.;
RT   "The secreted protein discovery initiative (SPDI), a large-scale effort to
RT   identify novel human secreted and transmembrane proteins: a bioinformatics
RT   assessment.";
RL   Genome Res. 13:2265-2270(2003).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RX   PubMed=14702039; DOI=10.1038/ng1285;
RA   Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA   Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA   Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA   Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA   Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA   Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA   Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA   Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA   Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA   Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA   Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA   Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA   Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA   Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA   Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA   Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA   Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA   Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA   Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA   Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA   Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA   Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA   Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA   Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA   Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA   Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA   Isogai T., Sugano S.;
RT   "Complete sequencing and characterization of 21,243 full-length human
RT   cDNAs.";
RL   Nat. Genet. 36:40-45(2004).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC   TISSUE=Brain;
RA   Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.,
RA   Ohara O., Nagase T., Kikuno R.F.;
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [7]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND VARIANT VAL-316.
RX   PubMed=16710414; DOI=10.1038/nature04727;
RA   Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A.,
RA   Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C.,
RA   Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.,
RA   Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C.,
RA   Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W.,
RA   Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J.,
RA   Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J.,
RA   Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y.,
RA   Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J.,
RA   Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H.,
RA   Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L.,
RA   Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J.,
RA   Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S.,
RA   Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K.,
RA   Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R.,
RA   Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M.,
RA   Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S.,
RA   Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J.,
RA   Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W.,
RA   McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N.,
RA   Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V.,
RA   Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J.,
RA   Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E.,
RA   Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S.,
RA   Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M.,
RA   White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H.,
RA   Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E.,
RA   Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G.,
RA   Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.;
RT   "The DNA sequence and biological annotation of human chromosome 1.";
RL   Nature 441:315-321(2006).
RN   [8]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN   [9]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   TISSUE=Cervix, and Pancreas;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [10]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 8-428 (ISOFORM 1).
RA   Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.;
RT   "Cloning of human full open reading frames in Gateway(TM) system entry
RT   vector (pDONR201).";
RL   Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
RN   [11]
RP   PROTEIN SEQUENCE OF 33-47.
RX   PubMed=15340161; DOI=10.1110/ps.04682504;
RA   Zhang Z., Henzel W.J.;
RT   "Signal peptide prediction based on analysis of experimentally verified
RT   cleavage sites.";
RL   Protein Sci. 13:2819-2824(2004).
RN   [12]
RP   X-RAY CRYSTALLOGRAPHY (2.17 ANGSTROMS) OF 33-428 IN COMPLEXES WITH MALONATE
RP   AND TARTRATE, ACTIVE SITE, PROBABLE SUBSTRATE-BINDING SITES, CATALYTIC
RP   ACTIVITY, FUNCTION, SUBUNIT, AND MUTAGENESIS OF ARG-58; HIS-59; ARG-62;
RP   TYR-106; ARG-168; ALA-257; SER-285; LEU-289; HIS-334 AND ASP-335.
RX   PubMed=23807634; DOI=10.1007/s13238-013-3031-z;
RA   Li J., Dong Y., Lu X., Wang L., Peng W., Zhang X.C., Rao Z.;
RT   "Crystal structures and biochemical studies of human lysophosphatidic acid
RT   phosphatase type 6.";
RL   Protein Cell 4:548-561(2013).
CC   -!- FUNCTION: Hydrolyzes lysophosphatidic acid (LPA) containing a medium
CC       length fatty acid chain to the corresponding monoacylglycerol. Has
CC       highest activity with lysophosphatidic acid containing myristate
CC       (C14:0), monounsaturated oleate (C18:1) or palmitate (C16:0), and lower
CC       activity with C18:0 and C6:0 lysophosphatidic acid.
CC       {ECO:0000269|PubMed:10506173, ECO:0000269|PubMed:23807634}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a phosphate monoester + H2O = an alcohol + phosphate;
CC         Xref=Rhea:RHEA:15017, ChEBI:CHEBI:15377, ChEBI:CHEBI:30879,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:67140; EC=3.1.3.2;
CC         Evidence={ECO:0000269|PubMed:10506173, ECO:0000269|PubMed:23807634};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:15018;
CC         Evidence={ECO:0000305|PubMed:10506173};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=1-(9Z-octadecenoyl)-sn-glycero-3-phosphate + H2O = 1-(9Z-
CC         octadecenoyl)-sn-glycerol + phosphate; Xref=Rhea:RHEA:39835,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:43474, ChEBI:CHEBI:74544,
CC         ChEBI:CHEBI:75757; Evidence={ECO:0000269|PubMed:10506173};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:39836;
CC         Evidence={ECO:0000305|PubMed:10506173};
CC   -!- SUBUNIT: Monomer. {ECO:0000269|PubMed:23807634}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:10506173}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q9NPH0-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q9NPH0-2; Sequence=VSP_014121, VSP_014122;
CC   -!- TISSUE SPECIFICITY: Highly expressed in kidney, heart, small intestine,
CC       muscle, liver, prostate, testis, ovary and weakly expressed in thymus
CC       and colon. {ECO:0000269|PubMed:10506173, ECO:0000269|PubMed:12010880}.
CC   -!- INDUCTION: Induced with the differentiation from myoblast to myotube.
CC       {ECO:0000269|PubMed:10506173}.
CC   -!- SIMILARITY: Belongs to the histidine acid phosphatase family.
CC       {ECO:0000305}.
CC   -!- CAUTION: It is uncertain whether Met-1 or Met-8 is the initiator.
CC       {ECO:0000305}.
CC   -!- CAUTION: Was originally reported to be located in the mitochondrion,
CC       but the evidence seems to be weak and contradictory with the presence
CC       of a cleaved signal sequence. {ECO:0000305|PubMed:10506173}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAA89311.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC       Sequence=BAD92485.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR   EMBL; AB031478; BAA89311.1; ALT_INIT; mRNA.
DR   EMBL; AB030039; BAA94309.2; -; mRNA.
DR   EMBL; KJ534759; AHW56399.1; -; mRNA.
DR   EMBL; AY358552; AAQ88916.1; -; mRNA.
DR   EMBL; AK000657; BAA91310.1; -; mRNA.
DR   EMBL; AB209248; BAD92485.1; ALT_INIT; mRNA.
DR   EMBL; AC241644; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AC242628; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AL359207; CAI15199.1; -; Genomic_DNA.
DR   EMBL; CH471223; EAW50931.1; -; Genomic_DNA.
DR   EMBL; BC009965; AAH09965.1; -; mRNA.
DR   EMBL; BC034686; AAH34686.1; -; mRNA.
DR   EMBL; CR457101; CAG33382.1; -; mRNA.
DR   CCDS; CCDS928.1; -. [Q9NPH0-1]
DR   RefSeq; NP_057445.4; NM_016361.4. [Q9NPH0-1]
DR   PDB; 4JOB; X-ray; 2.17 A; A=33-428.
DR   PDB; 4JOC; X-ray; 2.21 A; A=33-428.
DR   PDB; 4JOD; X-ray; 2.21 A; A=33-428.
DR   PDBsum; 4JOB; -.
DR   PDBsum; 4JOC; -.
DR   PDBsum; 4JOD; -.
DR   AlphaFoldDB; Q9NPH0; -.
DR   SMR; Q9NPH0; -.
DR   BioGRID; 119378; 30.
DR   IntAct; Q9NPH0; 16.
DR   STRING; 9606.ENSP00000463574; -.
DR   SwissLipids; SLP:000001294; -.
DR   DEPOD; ACP6; -.
DR   iPTMnet; Q9NPH0; -.
DR   PhosphoSitePlus; Q9NPH0; -.
DR   BioMuta; ACP6; -.
DR   DMDM; 317373268; -.
DR   EPD; Q9NPH0; -.
DR   jPOST; Q9NPH0; -.
DR   MassIVE; Q9NPH0; -.
DR   PaxDb; Q9NPH0; -.
DR   PeptideAtlas; Q9NPH0; -.
DR   PRIDE; Q9NPH0; -.
DR   ProteomicsDB; 81995; -. [Q9NPH0-1]
DR   ProteomicsDB; 81996; -. [Q9NPH0-2]
DR   Antibodypedia; 33980; 181 antibodies from 22 providers.
DR   DNASU; 51205; -.
DR   Ensembl; ENST00000487562.5; ENSP00000481777.1; ENSG00000162836.12. [Q9NPH0-2]
DR   Ensembl; ENST00000583509.7; ENSP00000463574.1; ENSG00000162836.12. [Q9NPH0-1]
DR   GeneID; 51205; -.
DR   KEGG; hsa:51205; -.
DR   MANE-Select; ENST00000583509.7; ENSP00000463574.1; NM_016361.5; NP_057445.4.
DR   UCSC; uc001epr.3; human.
DR   CTD; 51205; -.
DR   DisGeNET; 51205; -.
DR   GeneCards; ACP6; -.
DR   HGNC; HGNC:29609; ACP6.
DR   HPA; ENSG00000162836; Low tissue specificity.
DR   MIM; 611471; gene.
DR   neXtProt; NX_Q9NPH0; -.
DR   OpenTargets; ENSG00000162836; -.
DR   PharmGKB; PA134930830; -.
DR   VEuPathDB; HostDB:ENSG00000162836; -.
DR   eggNOG; KOG3720; Eukaryota.
DR   GeneTree; ENSGT00940000158408; -.
DR   HOGENOM; CLU_030431_5_1_1; -.
DR   InParanoid; Q9NPH0; -.
DR   OMA; SWPPFTS; -.
DR   OrthoDB; 1221585at2759; -.
DR   PhylomeDB; Q9NPH0; -.
DR   TreeFam; TF318821; -.
DR   BRENDA; 3.1.3.106; 2681.
DR   PathwayCommons; Q9NPH0; -.
DR   Reactome; R-HSA-1483166; Synthesis of PA.
DR   SignaLink; Q9NPH0; -.
DR   BioGRID-ORCS; 51205; 9 hits in 1068 CRISPR screens.
DR   ChiTaRS; ACP6; human.
DR   GeneWiki; ACP6; -.
DR   GenomeRNAi; 51205; -.
DR   Pharos; Q9NPH0; Tbio.
DR   PRO; PR:Q9NPH0; -.
DR   Proteomes; UP000005640; Chromosome 1.
DR   RNAct; Q9NPH0; protein.
DR   Bgee; ENSG00000162836; Expressed in right uterine tube and 172 other tissues.
DR   ExpressionAtlas; Q9NPH0; baseline and differential.
DR   GO; GO:0005737; C:cytoplasm; IDA:MGI.
DR   GO; GO:0005759; C:mitochondrial matrix; TAS:Reactome.
DR   GO; GO:0005739; C:mitochondrion; IDA:UniProtKB.
DR   GO; GO:0003993; F:acid phosphatase activity; IEA:UniProtKB-EC.
DR   GO; GO:0052642; F:lysophosphatidic acid phosphatase activity; IDA:UniProtKB.
DR   GO; GO:0016791; F:phosphatase activity; IBA:GO_Central.
DR   GO; GO:0016311; P:dephosphorylation; IBA:GO_Central.
DR   GO; GO:0002244; P:hematopoietic progenitor cell differentiation; IEA:Ensembl.
DR   GO; GO:2001311; P:lysobisphosphatidic acid metabolic process; IDA:UniProtKB.
DR   GO; GO:0006654; P:phosphatidic acid biosynthetic process; TAS:Reactome.
DR   GO; GO:0006644; P:phospholipid metabolic process; IMP:UniProtKB.
DR   CDD; cd07061; HP_HAP_like; 1.
DR   Gene3D; 3.40.50.1240; -; 1.
DR   InterPro; IPR033379; Acid_Pase_AS.
DR   InterPro; IPR000560; His_Pase_clade-2.
DR   InterPro; IPR029033; His_PPase_superfam.
DR   Pfam; PF00328; His_Phos_2; 1.
DR   SUPFAM; SSF53254; SSF53254; 1.
DR   PROSITE; PS00616; HIS_ACID_PHOSPHAT_1; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Alternative splicing; Direct protein sequencing; Hydrolase;
KW   Lipid metabolism; Mitochondrion; Phospholipid metabolism;
KW   Reference proteome; Transit peptide.
FT   TRANSIT         1..32
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000269|PubMed:15340161"
FT   CHAIN           33..428
FT                   /note="Lysophosphatidic acid phosphatase type 6"
FT                   /id="PRO_0000023965"
FT   REGION          58..168
FT                   /note="Substrate binding"
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        59
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   ACT_SITE        335
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000305|PubMed:23807634"
FT   VAR_SEQ         261..271
FT                   /note="AHNLPSCPMLK -> EKMGSCRFHGS (in isoform 2)"
FT                   /evidence="ECO:0000303|Ref.6"
FT                   /id="VSP_014121"
FT   VAR_SEQ         272..428
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|Ref.6"
FT                   /id="VSP_014122"
FT   VARIANT         316
FT                   /note="M -> V (in dbSNP:rs6593795)"
FT                   /id="VAR_022678"
FT   MUTAGEN         58
FT                   /note="R->A: Abolishes enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         59
FT                   /note="H->A: Abolishes enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:10506173,
FT                   ECO:0000269|PubMed:23807634"
FT   MUTAGEN         62
FT                   /note="R->A: Abolishes enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         106
FT                   /note="Y->F: Decreases enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         110
FT                   /note="Y->F: Decreases enzyme activity."
FT   MUTAGEN         168
FT                   /note="R->A: Abolishes enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         257
FT                   /note="A->F,L: Decreases enzyme activity by interfering
FT                   with water access to the active site cavity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         257
FT                   /note="A->W: Abolishes enzyme activity by interfering with
FT                   water access to the active site cavity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         285
FT                   /note="S->W: Decreases activity toward substrates with
FT                   medium and long aliphatic chains, but not toward substrates
FT                   with short aliphatic chains."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         289
FT                   /note="L->W: Decreases activity toward substrates with
FT                   medium and long aliphatic chains, but not toward substrates
FT                   with short aliphatic chains."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         334
FT                   /note="H->A: Abolishes enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   MUTAGEN         335
FT                   /note="D->A: Abolishes enzyme activity."
FT                   /evidence="ECO:0000269|PubMed:23807634"
FT   CONFLICT        428
FT                   /note="E -> D (in Ref. 10; CAG33382)"
FT                   /evidence="ECO:0000305"
FT   HELIX           45..47
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          48..58
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          69..71
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           78..81
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           85..87
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          92..100
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           105..111
FT                   /evidence="ECO:0007829|PDB:4JOD"
FT   TURN            116..118
FT                   /evidence="ECO:0007829|PDB:4JOC"
FT   HELIX           126..143
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   TURN            144..146
FT                   /evidence="ECO:0007829|PDB:4JOC"
FT   STRAND          152..154
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   TURN            156..158
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          159..163
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           167..181
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          185..187
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          190..193
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   TURN            196..198
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   TURN            205..207
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           209..221
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           222..224
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           228..238
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           249..261
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           268..272
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           274..288
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           294..314
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          318..320
FT                   /evidence="ECO:0007829|PDB:4JOD"
FT   TURN            322..324
FT                   /evidence="ECO:0007829|PDB:4JOD"
FT   STRAND          327..333
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           335..344
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          358..366
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   TURN            367..369
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          372..378
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   STRAND          381..383
FT                   /evidence="ECO:0007829|PDB:4JOC"
FT   STRAND          389..394
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           395..402
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   TURN            403..405
FT                   /evidence="ECO:0007829|PDB:4JOB"
FT   HELIX           409..416
FT                   /evidence="ECO:0007829|PDB:4JOB"
SQ   SEQUENCE   428 AA;  48886 MW;  3CA08CFD1BB44BFA CRC64;
     MITGVFSMRL WTPVGVLTSL AYCLHQRRVA LAELQEADGQ CPVDRSLLKL KMVQVVFRHG
     ARSPLKPLPL EEQVEWNPQL LEVPPQTQFD YTVTNLAGGP KPYSPYDSQY HETTLKGGMF
     AGQLTKVGMQ QMFALGERLR KNYVEDIPFL SPTFNPQEVF IRSTNIFRNL ESTRCLLAGL
     FQCQKEGPII IHTDEADSEV LYPNYQSCWS LRQRTRGRRQ TASLQPGISE DLKKVKDRMG
     IDSSDKVDFF ILLDNVAAEQ AHNLPSCPML KRFARMIEQR AVDTSLYILP KEDRESLQMA
     VGPFLHILES NLLKAMDSAT APDKIRKLYL YAAHDVTFIP LLMTLGIFDH KWPPFAVDLT
     MELYQHLESK EWFVQLYYHG KEQVPRGCPD GLCPLDMFLN AMSVYTLSPE KYHALCSQTQ
     VMEVGNEE
 
 
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