PPAC_STRGC
ID PPAC_STRGC Reviewed; 311 AA.
AC P95765; A8AYR5;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 03-AUG-2022, entry version 134.
DE RecName: Full=Probable manganese-dependent inorganic pyrophosphatase;
DE EC=3.6.1.1;
DE AltName: Full=Pyrophosphate phospho-hydrolase;
DE Short=PPase;
GN Name=ppaC; OrderedLocusNames=SGO_1648;
OS Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 /
OS DL1 / V288).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC Streptococcus.
OX NCBI_TaxID=467705;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8926080; DOI=10.1128/iai.64.10.4137-4142.1996;
RA Whittaker C.J., Clemans D.L., Kolenbrander P.E.;
RT "Insertional inactivation of an intrageneric coaggregation-relevant adhesin
RT locus from Streptococcus gordonii DL1 (Challis).";
RL Infect. Immun. 64:4137-4142(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288;
RX PubMed=17720781; DOI=10.1128/jb.01023-07;
RA Vickerman M.M., Iobst S., Jesionowski A.M., Gill S.R.;
RT "Genome-wide transcriptional changes in Streptococcus gordonii in response
RT to competence signaling peptide.";
RL J. Bacteriol. 189:7799-7807(2007).
RN [3]
RP X-RAY CRYSTALLOGRAPHY (1.5 ANGSTROMS).
RX PubMed=11697905; DOI=10.1006/jmbi.2001.5070;
RA Ahn S., Milner A.J., Fuetterer K., Konopka M., Ilias M., Young T.W.,
RA White S.A.;
RT "The 'open' and 'closed' structures of the type-C inorganic
RT pyrophosphatases from Bacillus subtilis and Streptococcus gordonii.";
RL J. Mol. Biol. 313:797-811(2001).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=diphosphate + H2O = H(+) + 2 phosphate; Xref=Rhea:RHEA:24576,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:43474; EC=3.6.1.1;
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC Note=Binds 2 manganese ions per subunit.;
CC -!- SUBUNIT: Homodimer.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the PPase class C family. {ECO:0000305}.
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DR EMBL; U57759; AAB39104.1; -; Genomic_DNA.
DR EMBL; CP000725; ABV09962.1; -; Genomic_DNA.
DR RefSeq; WP_012130706.1; NC_009785.1.
DR PDB; 1K20; X-ray; 1.50 A; A/B=2-311.
DR PDB; 1WPP; X-ray; 2.05 A; A/B=1-311.
DR PDBsum; 1K20; -.
DR PDBsum; 1WPP; -.
DR AlphaFoldDB; P95765; -.
DR SMR; P95765; -.
DR STRING; 467705.SGO_1648; -.
DR EnsemblBacteria; ABV09962; ABV09962; SGO_1648.
DR KEGG; sgo:SGO_1648; -.
DR eggNOG; COG1227; Bacteria.
DR HOGENOM; CLU_025243_0_1_9; -.
DR OMA; IMLCAIL; -.
DR BRENDA; 3.6.1.1; 5934.
DR EvolutionaryTrace; P95765; -.
DR Proteomes; UP000001131; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004427; F:inorganic diphosphatase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0030145; F:manganese ion binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.10.310.20; -; 1.
DR HAMAP; MF_00207; PPase_C; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR004097; DHHA2.
DR InterPro; IPR038222; DHHA2_dom_sf.
DR InterPro; IPR022934; Mn-dep_inorganic_PyrPase.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02833; DHHA2; 1.
DR SMART; SM01131; DHHA2; 1.
DR SUPFAM; SSF64182; SSF64182; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytoplasm; Hydrolase; Manganese; Metal-binding;
KW Reference proteome.
FT CHAIN 1..311
FT /note="Probable manganese-dependent inorganic
FT pyrophosphatase"
FT /id="PRO_0000158589"
FT BINDING 9
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="1"
FT BINDING 13
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="1"
FT BINDING 15
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT BINDING 77
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="1"
FT BINDING 77
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT BINDING 99
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT BINDING 151
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /ligand_label="2"
FT STRAND 4..7
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 14..31
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 35..37
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 39..41
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 45..54
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 66..68
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 71..77
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 81..83
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 88..90
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 91..98
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 112..115
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 117..119
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 121..131
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 138..152
FT /evidence="ECO:0007829|PDB:1K20"
FT TURN 153..156
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 162..175
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 179..188
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 198..201
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 204..211
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 214..224
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 226..230
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 233..247
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 250..258
FT /evidence="ECO:0007829|PDB:1K20"
FT TURN 259..262
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 263..271
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 273..280
FT /evidence="ECO:0007829|PDB:1K20"
FT STRAND 288..292
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 297..300
FT /evidence="ECO:0007829|PDB:1K20"
FT HELIX 302..310
FT /evidence="ECO:0007829|PDB:1K20"
SQ SEQUENCE 311 AA; 33541 MW; 610A704B681E2889 CRC64;
MSKILVFGHQ NPDSDAIGSS YAFAYLAREA YGLDTEAVAL GEPNEETAFV LDYFGVAAPR
VITSAKAEGA EQVILTDHNE FQQSVADIAE VEVYGVVDHH RVANFETANP LYMRLEPVGS
ASSIVYRMFK EHSVAVSKEI AGLMLSGLIS DTLLLKSPTT HPTDKAIAPE LAELAGVNLE
EYGLAMLKAG TNLASKSAEE LIDIDAKTFE LNGNNVRVAQ VNTVDIAEVL ERQAEIEAAI
EKAIADNGYS DFVLMITDII NSNSEILAIG SNMDKVEAAF NFVLENNHAF LAGAVSRKKQ
VVPQLTESFN A