ID   PPD7_ARATH              Reviewed;         280 AA.
AC   F4J7A7; Q9MA54;
DT   13-NOV-2013, integrated into UniProtKB/Swiss-Prot.
DT   28-JUN-2011, sequence version 1.
DT   03-AUG-2022, entry version 62.
DE   RecName: Full=PsbP domain-containing protein 7, chloroplastic;
DE   AltName: Full=Photosystem II reaction center PsbP family protein;
DE   Flags: Precursor;
GN   Name=PPD7; OrderedLocusNames=At3g05410; ORFNames=F22F7.15;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130713; DOI=10.1038/35048706;
RA   Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA   Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA   Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA   Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA   Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA   Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA   Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA   Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA   Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA   Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA   Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA   de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA   Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA   Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA   Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA   Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA   Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA   Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA   Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA   Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA   Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA   Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT   "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL   Nature 408:820-822(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RA   Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2-280 (ISOFORM 1).
RC   STRAIN=cv. Columbia;
RX   PubMed=14993207; DOI=10.1101/gr.1515604;
RA   Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA   Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA   Weissenbach J., Salanoubat M.;
RT   "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT   combined approach to evaluate and improve Arabidopsis genome annotation.";
RL   Genome Res. 14:406-413(2004).
RN   [5]
RP   IDENTIFICATION.
RX   PubMed=19944772; DOI=10.1016/j.ympev.2009.11.021;
RA   Sato N.;
RT   "Phylogenomic and structural modeling analyses of the PsbP superfamily
RT   reveal multiple small segment additions in the evolution of photosystem II-
RT   associated PsbP protein in green plants.";
RL   Mol. Phylogenet. Evol. 56:176-186(2010).
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=F4J7A7-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=F4J7A7-2; Sequence=VSP_053424;
CC   -!- SIMILARITY: Belongs to the psbP family. {ECO:0000305}.
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DR   EMBL; AC009606; AAF64541.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE74235.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE74236.1; -; Genomic_DNA.
DR   EMBL; BT015929; AAV31159.1; -; mRNA.
DR   EMBL; BT020565; AAW78584.1; -; mRNA.
DR   EMBL; BX825930; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; NP_001154592.1; NM_001161120.2. [F4J7A7-1]
DR   RefSeq; NP_187192.1; NM_111414.2. [F4J7A7-2]
DR   AlphaFoldDB; F4J7A7; -.
DR   SMR; F4J7A7; -.
DR   STRING; 3702.AT3G05410.2; -.
DR   PaxDb; F4J7A7; -.
DR   PRIDE; F4J7A7; -.
DR   ProteomicsDB; 249041; -. [F4J7A7-1]
DR   EnsemblPlants; AT3G05410.1; AT3G05410.1; AT3G05410. [F4J7A7-2]
DR   EnsemblPlants; AT3G05410.2; AT3G05410.2; AT3G05410. [F4J7A7-1]
DR   GeneID; 819705; -.
DR   Gramene; AT3G05410.1; AT3G05410.1; AT3G05410. [F4J7A7-2]
DR   Gramene; AT3G05410.2; AT3G05410.2; AT3G05410. [F4J7A7-1]
DR   KEGG; ath:AT3G05410; -.
DR   Araport; AT3G05410; -.
DR   TAIR; locus:2079792; AT3G05410.
DR   eggNOG; ENOG502QS0I; Eukaryota.
DR   HOGENOM; CLU_075416_0_0_1; -.
DR   InParanoid; F4J7A7; -.
DR   OMA; DTNEGFE; -.
DR   OrthoDB; 1582429at2759; -.
DR   PRO; PR:F4J7A7; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; F4J7A7; baseline and differential.
DR   Genevisible; F4J7A7; AT.
DR   GO; GO:0009543; C:chloroplast thylakoid lumen; IDA:TAIR.
DR   GO; GO:0019898; C:extrinsic component of membrane; IEA:InterPro.
DR   GO; GO:0009654; C:photosystem II oxygen evolving complex; IEA:InterPro.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0015979; P:photosynthesis; IEA:InterPro.
DR   InterPro; IPR016123; Mog1/PsbP_a/b/a-sand.
DR   InterPro; IPR002683; PsbP_C.
DR   Pfam; PF01789; PsbP; 1.
DR   SUPFAM; SSF55724; SSF55724; 1.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Chloroplast; Plastid; Reference proteome;
KW   Transit peptide.
FT   TRANSIT         1..36
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   CHAIN           37..280
FT                   /note="PsbP domain-containing protein 7, chloroplastic"
FT                   /id="PRO_0000424373"
FT   VAR_SEQ         178..280
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|Ref.3"
FT                   /id="VSP_053424"
SQ   SEQUENCE   280 AA;  30524 MW;  D0348CE5773E30ED CRC64;
     MSLKPYFSLL YSSPTNVKLS NFLIAQQPSG DLKTTPAEEF SPLVEKFNRR LLLGVGSSSV
     LAIGANFGGT TSFILGLSPG IGRNLKLDVI YPIGGYSRCI DTVEGFEFIY PATWVGDQTL
     LYRAAEKSER ENSLDLPPAR NSRRKNVNEP VVAFGPPGST GELNVSVIVS PVSPSFSIEA
     FGGPKEVGEA IVRTVTGSGQ RADLKGTLLE SSIRQDSERN LKYYELEFKV ESPLFRRHNV
     AVCCAHSGRL YTLNAQAPES AWSEVKSEIY TTAKSFNIIS