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PPIG_RAT
ID   PPIG_RAT                Reviewed;         752 AA.
AC   O55035; Q5U346;
DT   15-MAR-2004, integrated into UniProtKB/Swiss-Prot.
DT   10-MAY-2005, sequence version 2.
DT   25-MAY-2022, entry version 134.
DE   RecName: Full=Peptidyl-prolyl cis-trans isomerase G;
DE            Short=PPIase G;
DE            Short=Peptidyl-prolyl isomerase G;
DE            EC=5.2.1.8 {ECO:0000269|PubMed:9525923};
DE   AltName: Full=Cyclophilin G;
DE   AltName: Full=Matrin cyclophilin;
DE            Short=Matrin-cyp;
DE   AltName: Full=Rotamase G;
GN   Name=Ppig;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, CATALYTIC ACTIVITY, ACTIVITY
RP   REGULATION, PHOSPHORYLATION, AND SUBCELLULAR LOCATION.
RC   STRAIN=Sprague-Dawley; TISSUE=Insulinoma;
RX   PubMed=9525923; DOI=10.1074/jbc.273.14.8183;
RA   Mortillaro M.J., Berezney R.;
RT   "Matrin CYP, an SR-rich cyclophilin that associates with the nuclear matrix
RT   and splicing factors.";
RL   J. Biol. Chem. 273:8183-8192(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Lung;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [3]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-354 AND THR-356, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=16641100; DOI=10.1073/pnas.0600895103;
RA   Hoffert J.D., Pisitkun T., Wang G., Shen R.-F., Knepper M.A.;
RT   "Quantitative phosphoproteomics of vasopressin-sensitive renal cells:
RT   regulation of aquaporin-2 phosphorylation at two sites.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:7159-7164(2006).
RN   [4]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-395 AND SER-685, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22673903; DOI=10.1038/ncomms1871;
RA   Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C.,
RA   Olsen J.V.;
RT   "Quantitative maps of protein phosphorylation sites across 14 different rat
RT   organs and tissues.";
RL   Nat. Commun. 3:876-876(2012).
CC   -!- FUNCTION: PPIase that catalyzes the cis-trans isomerization of proline
CC       imidic peptide bonds in oligopeptides and may therefore assist protein
CC       folding. May be implicated in the folding, transport, and assembly of
CC       proteins. May play an important role in the regulation of pre-mRNA
CC       splicing. {ECO:0000269|PubMed:9525923}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[protein]-peptidylproline (omega=180) = [protein]-
CC         peptidylproline (omega=0); Xref=Rhea:RHEA:16237, Rhea:RHEA-
CC         COMP:10747, Rhea:RHEA-COMP:10748, ChEBI:CHEBI:83833,
CC         ChEBI:CHEBI:83834; EC=5.2.1.8; Evidence={ECO:0000269|PubMed:9525923};
CC   -!- ACTIVITY REGULATION: Inhibited by cyclosporin A (CsA).
CC       {ECO:0000269|PubMed:9525923}.
CC   -!- SUBUNIT: Interacts with CLK1, PNN and with the phosphorylated C-
CC       terminal domain of RNA polymerase II. {ECO:0000250|UniProtKB:Q13427}.
CC   -!- SUBCELLULAR LOCATION: Nucleus matrix {ECO:0000269|PubMed:9525923}.
CC       Nucleus speckle {ECO:0000269|PubMed:9525923}. Note=Colocalizes with
CC       splicing factors at nuclear speckles. {ECO:0000269|PubMed:9525923}.
CC   -!- DOMAIN: The RS domain is required for the interaction with the
CC       phosphorylated C-terminal domain of RNA polymerase II.
CC       {ECO:0000250|UniProtKB:Q13427}.
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DR   EMBL; AF043642; AAC00191.1; -; mRNA.
DR   EMBL; BC085723; AAH85723.1; -; mRNA.
DR   RefSeq; NP_113981.1; NM_031793.1.
DR   AlphaFoldDB; O55035; -.
DR   SMR; O55035; -.
DR   IntAct; O55035; 1.
DR   STRING; 10116.ENSRNOP00000010216; -.
DR   iPTMnet; O55035; -.
DR   PhosphoSitePlus; O55035; -.
DR   jPOST; O55035; -.
DR   PaxDb; O55035; -.
DR   PRIDE; O55035; -.
DR   GeneID; 83624; -.
DR   KEGG; rno:83624; -.
DR   UCSC; RGD:620315; rat.
DR   CTD; 9360; -.
DR   RGD; 620315; Ppig.
DR   eggNOG; KOG0546; Eukaryota.
DR   InParanoid; O55035; -.
DR   PhylomeDB; O55035; -.
DR   PRO; PR:O55035; -.
DR   Proteomes; UP000002494; Unplaced.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0016363; C:nuclear matrix; IDA:RGD.
DR   GO; GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0016018; F:cyclosporin A binding; ISS:UniProtKB.
DR   GO; GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IDA:RGD.
DR   GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR   GO; GO:0000413; P:protein peptidyl-prolyl isomerization; ISO:RGD.
DR   Gene3D; 2.40.100.10; -; 1.
DR   InterPro; IPR029000; Cyclophilin-like_dom_sf.
DR   InterPro; IPR020892; Cyclophilin-type_PPIase_CS.
DR   InterPro; IPR002130; Cyclophilin-type_PPIase_dom.
DR   Pfam; PF00160; Pro_isomerase; 1.
DR   PRINTS; PR00153; CSAPPISMRASE.
DR   SUPFAM; SSF50891; SSF50891; 1.
DR   PROSITE; PS00170; CSA_PPIASE_1; 1.
DR   PROSITE; PS50072; CSA_PPIASE_2; 1.
PE   1: Evidence at protein level;
KW   Isomerase; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome;
KW   Rotamase; Ubl conjugation.
FT   CHAIN           1..752
FT                   /note="Peptidyl-prolyl cis-trans isomerase G"
FT                   /id="PRO_0000064151"
FT   DOMAIN          11..176
FT                   /note="PPIase cyclophilin-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00156"
FT   REGION          182..752
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        197..216
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        226..250
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        286..309
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        325..347
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        348..366
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        373..450
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        464..565
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        566..580
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        581..601
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        602..622
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        623..685
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        686..701
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        702..752
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         252
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         254
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         255
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         257
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         288
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         313
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         354
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:16641100"
FT   MOD_RES         356
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:16641100"
FT   MOD_RES         384
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         395
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         411
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         413
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         685
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:22673903"
FT   MOD_RES         688
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         694
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         742
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         743
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         746
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   MOD_RES         751
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   CROSSLNK        390
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   CROSSLNK        691
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:Q13427"
FT   CONFLICT        219
FT                   /note="S -> T (in Ref. 1; AAC00191)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        327
FT                   /note="F -> S (in Ref. 1; AAC00191)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        417
FT                   /note="K -> G (in Ref. 1; AAC00191)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        421..422
FT                   /note="EK -> GG (in Ref. 1; AAC00191)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        429
FT                   /note="S -> L (in Ref. 1; AAC00191)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        441
FT                   /note="E -> G (in Ref. 1; AAC00191)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   752 AA;  88379 MW;  4EC4C0D07CCB76B9 CRC64;
     MGIKVQRPRC FFDIAINNQP AGRVVFELFS DVCPKTCENF RCLCTGEKGT GKSTQKPLHY
     KSCLFHRVVK DFMVQGGDFS EGNGRGGESI YGGFFEDESF AVKHNKEFLL SMANRGKDTN
     GSQFFITTKP TPHLDGHHVV FGQVISGQEV VREIENQKTD AASKPFAEVR ILSCGELVPK
     SKVKKEEKKR HKSSSSSSSS DSDSSSDSQS SSDSSDSESA SEEKSRKRKK KHRKNSRKHK
     KEKKKRKKSK KSPSSESEAD NVDAQPQSTV RPEEIPPIPE NRFLMRKSPP KADDKERKNR
     ERERERECNP PNSQPASYQR RFLVTRFGRK IKGRGPRRYR TPSRSRSRDR FRRSETPPHW
     RQEMQRAQRM RVSSGERWIK GDKSELNEIK ENQRSPVRVK EKKITDHRHM SESPNRKIEK
     EKKVKDHKSE SKERDIRRNS EKDDKYNKNK VKKRGKSKSR SKSKERSKSK ERDSKHSRHE
     DKRVRSRSKE RDHETTKEKE KQLDSKGKDQ ERSRSKENSK QVESKSNEHD HSKSKEKDRR
     AQSRSRERDL TKSKHSYNSR TRERSRSRDR SRRVRSRSHD RDRSRSKEYH RYREQEYRRR
     GRSRSRDRRT PGRSRSKDRR RRRRDSRSSE REESQSRNKE KYRSQDSKSS HRKENSEGEK
     RMYSKSRDHS SSNNNREKKA DIDQSPVSKT KQSSQDNEVK SSTLKNQEDE KTRSPVEKEN
     QKSKGQENDH VHDKNKKCDH ESSPGTDEDK SG
 
 
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