ID   PPL1_ARATH              Reviewed;         230 AA.
AC   P82538;
DT   01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT   01-DEC-2000, sequence version 1.
DT   25-MAY-2022, entry version 130.
DE   RecName: Full=PsbP-like protein 1, chloroplastic;
DE   AltName: Full=OEC23-like protein 4;
DE   AltName: Full=PsbP-related thylakoid lumenal protein 2;
DE   Flags: Precursor;
GN   Name=PPL1; OrderedLocusNames=At3g55330; ORFNames=T26I12.210;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130713; DOI=10.1038/35048706;
RA   Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA   Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA   Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA   Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA   Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA   Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA   Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA   Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA   Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA   Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA   Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA   de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA   Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA   Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA   Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA   Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA   Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA   Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA   Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA   Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA   Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA   Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT   "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL   Nature 408:820-822(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Full-length cDNA from Arabidopsis thaliana.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   PROTEIN SEQUENCE OF 75-110, AND SUBCELLULAR LOCATION.
RX   PubMed=11719511; DOI=10.1074/jbc.m108575200;
RA   Schubert M., Petersson U.A., Haas B.J., Funk C., Schroeder W.P.,
RA   Kieselbach T.;
RT   "Proteome map of the chloroplast lumen of Arabidopsis thaliana.";
RL   J. Biol. Chem. 277:8354-8365(2002).
RN   [6]
RP   FUNCTION, GENE FAMILY, NOMENCLATURE, AND DISRUPTION PHENOTYPE.
RX   PubMed=17827269; DOI=10.1104/pp.107.105866;
RA   Ishihara S., Takabayashi A., Ido K., Endo T., Ifuku K., Sato F.;
RT   "Distinct functions for the two PsbP-like proteins PPL1 and PPL2 in the
RT   chloroplast thylakoid lumen of Arabidopsis.";
RL   Plant Physiol. 145:668-679(2007).
RN   [7]
RP   IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP   ANALYSIS].
RX   PubMed=18431481; DOI=10.1371/journal.pone.0001994;
RA   Zybailov B., Rutschow H., Friso G., Rudella A., Emanuelsson O., Sun Q.,
RA   van Wijk K.J.;
RT   "Sorting signals, N-terminal modifications and abundance of the chloroplast
RT   proteome.";
RL   PLoS ONE 3:E1994-E1994(2008).
RN   [8]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22092075; DOI=10.1021/pr200917t;
RA   Aryal U.K., Krochko J.E., Ross A.R.;
RT   "Identification of phosphoproteins in Arabidopsis thaliana leaves using
RT   polyethylene glycol fractionation, immobilized metal-ion affinity
RT   chromatography, two-dimensional gel electrophoresis and mass
RT   spectrometry.";
RL   J. Proteome Res. 11:425-437(2012).
CC   -!- FUNCTION: Required for efficient repair of photodamaged PSII, but not
CC       tightly associated with the complex. {ECO:0000269|PubMed:17827269}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid lumen
CC       {ECO:0000269|PubMed:11719511, ECO:0000269|PubMed:18431481}.
CC   -!- DISRUPTION PHENOTYPE: No visible phenotype.
CC       {ECO:0000269|PubMed:17827269}.
CC   -!- SIMILARITY: Belongs to the psbP family. {ECO:0000305}.
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DR   EMBL; AL132954; CAB75767.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE79369.1; -; Genomic_DNA.
DR   EMBL; AF419553; AAL31885.1; -; mRNA.
DR   EMBL; AY097338; AAM19854.1; -; mRNA.
DR   EMBL; AY087663; AAM65201.1; -; mRNA.
DR   PIR; PA0046; PA0046.
DR   PIR; T47672; T47672.
DR   RefSeq; NP_191093.1; NM_115391.5.
DR   AlphaFoldDB; P82538; -.
DR   SMR; P82538; -.
DR   STRING; 3702.AT3G55330.1; -.
DR   PaxDb; P82538; -.
DR   PRIDE; P82538; -.
DR   ProteomicsDB; 226489; -.
DR   EnsemblPlants; AT3G55330.1; AT3G55330.1; AT3G55330.
DR   GeneID; 824699; -.
DR   Gramene; AT3G55330.1; AT3G55330.1; AT3G55330.
DR   KEGG; ath:AT3G55330; -.
DR   Araport; AT3G55330; -.
DR   TAIR; locus:2100681; AT3G55330.
DR   eggNOG; ENOG502QU2U; Eukaryota.
DR   HOGENOM; CLU_039569_1_0_1; -.
DR   InParanoid; P82538; -.
DR   OMA; FLYPNGW; -.
DR   OrthoDB; 1480904at2759; -.
DR   PhylomeDB; P82538; -.
DR   PRO; PR:P82538; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; P82538; baseline and differential.
DR   Genevisible; P82538; AT.
DR   GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR   GO; GO:0009543; C:chloroplast thylakoid lumen; IEA:UniProtKB-SubCell.
DR   GO; GO:0098807; C:chloroplast thylakoid membrane protein complex; IDA:TAIR.
DR   GO; GO:0005829; C:cytosol; HDA:TAIR.
DR   GO; GO:0019898; C:extrinsic component of membrane; IEA:InterPro.
DR   GO; GO:0009654; C:photosystem II oxygen evolving complex; IEA:InterPro.
DR   GO; GO:0009579; C:thylakoid; HDA:TAIR.
DR   GO; GO:0031977; C:thylakoid lumen; IDA:TAIR.
DR   GO; GO:0042651; C:thylakoid membrane; IDA:TAIR.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0015979; P:photosynthesis; IEA:InterPro.
DR   InterPro; IPR016123; Mog1/PsbP_a/b/a-sand.
DR   InterPro; IPR002683; PsbP_C.
DR   Pfam; PF01789; PsbP; 1.
DR   SUPFAM; SSF55724; SSF55724; 1.
PE   1: Evidence at protein level;
KW   Chloroplast; Direct protein sequencing; Plastid; Reference proteome;
KW   Thylakoid; Transit peptide.
FT   TRANSIT         1..?
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   TRANSIT         ?..74
FT                   /note="Thylakoid"
FT                   /evidence="ECO:0000269|PubMed:11719511"
FT   CHAIN           75..230
FT                   /note="PsbP-like protein 1, chloroplastic"
FT                   /id="PRO_0000029588"
SQ   SEQUENCE   230 AA;  25623 MW;  A3E67E48A0F6E7CA CRC64;
     MASLKLSPSS PISISKVGVI PSSKKGLSFL VKAEHHSSSS SSHLQDKCQR RLIVTFGVVA
     PWISLLSRAP LSFAAESKKG FLAVSDNKDA YAFLYPFGWQ EVVIEGQDKV YKDVIEPLES
     VSVNLVPTSK QTIKEFGPPK QIAETLIKKV LAPPNQKTTL IDASEHDVDG KTYYQFEFTV
     QARNYTRHAL GTITVFNGNF YTLTTGANER RWEKMKDRLH TVVDSFKITV