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PPO_PRUAR
ID   PPO_PRUAR               Reviewed;         597 AA.
AC   O81103;
DT   28-FEB-2018, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1998, sequence version 1.
DT   03-AUG-2022, entry version 87.
DE   RecName: Full=Polyphenol oxidase latent form, chloroplastic {ECO:0000303|PubMed:28812349};
DE            Short=L-PaPPO {ECO:0000303|PubMed:28812349};
DE            Short=PA-PPO {ECO:0000303|PubMed:10198084};
DE   Contains:
DE     RecName: Full=Polyphenol oxidase active form, chloroplastic {ECO:0000303|PubMed:28812349};
DE              Short=A-PaPPO {ECO:0000303|PubMed:28812349};
DE              EC=1.10.3.1 {ECO:0000269|PubMed:10198084, ECO:0000269|PubMed:28812349};
DE   Flags: Precursor;
GN   Name=PPO {ECO:0000303|PubMed:10198084};
OS   Prunus armeniaca (Apricot) (Armeniaca vulgaris).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX   NCBI_TaxID=36596;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 102-119, TISSUE
RP   SPECIFICITY, DEVELOPMENTAL STAGE, AND ACTIVITY REGULATION.
RC   STRAIN=cv. Bergeron; TISSUE=Mesocarp;
RX   PubMed=10198084; DOI=10.1104/pp.119.4.1261;
RA   Chevalier T., de Rigal D., Mbeguie-A-Mbeguie D., Gauillard F.,
RA   Richard-Forget F., Fils-Lycaon B.R.;
RT   "Molecular cloning and characterization of apricot fruit polyphenol
RT   oxidase.";
RL   Plant Physiol. 119:1261-1270(1999).
RN   [2]
RP   FUNCTION, ACTIVITY REGULATION, BIOPHYSICOCHEMICAL PROPERTIES, MASS
RP   SPECTROMETRY, PROTEOLYTIC CLEAVAGE AT LEU-429, AND IDENTIFICATION BY MASS
RP   SPECTROMETRY.
RX   PubMed=28812349; DOI=10.1021/acs.jafc.7b03210;
RA   Derardja A.E., Pretzler M., Kampatsikas I., Barkat M., Rompel A.;
RT   "Purification and characterization of latent polyphenol oxidase from
RT   apricot (Prunus armeniaca L.).";
RL   J. Agric. Food Chem. 65:8203-8212(2017).
CC   -!- FUNCTION: [Polyphenol oxidase active form, chloroplastic]: Catalyzes
CC       the oxidation of mono- and o-diphenols to o-diquinones. Uses
CC       preferentially 4-methylcatechol and chlorogenic acid as substrates,
CC       followed by caffeic acid, pyrogallol, and catechol, but barely active
CC       toward dopamine and L-dopa. No activity detected with monophenols (e.g.
CC       phenol and tyramine). {ECO:0000269|PubMed:28812349}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=2 catechol + O2 = 2 1,2-benzoquinone + 2 H2O;
CC         Xref=Rhea:RHEA:21632, ChEBI:CHEBI:15377, ChEBI:CHEBI:15379,
CC         ChEBI:CHEBI:17253, ChEBI:CHEBI:18135; EC=1.10.3.1;
CC         Evidence={ECO:0000269|PubMed:10198084, ECO:0000269|PubMed:28812349};
CC   -!- COFACTOR:
CC       Name=Cu(2+); Xref=ChEBI:CHEBI:29036;
CC         Evidence={ECO:0000250|UniProtKB:Q9ZP19};
CC       Note=Binds 2 copper ions per subunit. {ECO:0000250|UniProtKB:Q9ZP19};
CC   -!- ACTIVITY REGULATION: Activated in the presence of substrate at low pH
CC       (PubMed:28812349). Specific activity fluctuates during fruit ripening,
CC       starting at immature-green stage, reaching a peak at the breaker stage,
CC       followed by a sharp decrease until the half-ripe stage to remain stable
CC       during the following development stages (PubMed:10198084). Triggered by
CC       CuSO(4) and by low concentrations of SDS. Repressed by several
CC       inhibitors including 4-hexylresorcinol, ascorbic acid, benzoic acid,
CC       kojic acid, glutathione (reduced form), L-cysteine and sodium
CC       metabisulfite. Inhibited by various salt such as FeSO(4), KCl, NaCl,
CC       CaCl(2), MnCl(2), NiCl(2) and AlCl(3). Spontaneously activated during
CC       storage at 4 degrees Celsius (PubMed:28812349).
CC       {ECO:0000269|PubMed:10198084, ECO:0000269|PubMed:28812349}.
CC   -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC       Kinetic parameters:
CC         KM=2 mM for 4-methylcatechol {ECO:0000269|PubMed:28812349};
CC         KM=2.7 mM for chlorogenic acid {ECO:0000269|PubMed:28812349};
CC         KM=5.3 mM for catechol {ECO:0000269|PubMed:28812349};
CC         KM=11 mM for pyrogallol {ECO:0000269|PubMed:28812349};
CC         Note=kcat is 700 sec(-1) with 4-methylcatechol as substrate. kcat is
CC         1400 sec(-1) with chlorogenic acid as substrate. kcat is 210 sec(-1)
CC         with catechol as substrate. kcat is 590 sec(-1) with pyrogallol as
CC         substrate. {ECO:0000269|PubMed:28812349};
CC       pH dependence:
CC         Optimum pH is 4.5 with catechol as substrate.
CC         {ECO:0000269|PubMed:28812349};
CC       Temperature dependence:
CC         Optimum temperature is 45 degrees Celsius with catechol as substrate.
CC         Completely inactivated after heating at 70 degrees Celsius for 10
CC         min. {ECO:0000269|PubMed:28812349};
CC   -!- SUBUNIT: Monomer. {ECO:0000250|UniProtKB:Q9ZP19}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid lumen
CC       {ECO:0000250|UniProtKB:Q6UIL3}.
CC   -!- TISSUE SPECIFICITY: Expressed in immature-green fruit.
CC       {ECO:0000269|PubMed:10198084}.
CC   -!- DEVELOPMENTAL STAGE: Transcripts are highly expressed in young,
CC       immature-green fruit, but turned off early in the ripening process. By
CC       contrast, protein levels seem stable throughout fruit ripening.
CC       {ECO:0000269|PubMed:10198084}.
CC   -!- MASS SPECTROMETRY: [Polyphenol oxidase active form, chloroplastic]:
CC       Mass=37455.6; Method=Electrospray;
CC       Evidence={ECO:0000269|PubMed:28812349};
CC   -!- SIMILARITY: Belongs to the tyrosinase family. {ECO:0000305}.
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DR   EMBL; AF020786; AAC28935.1; -; mRNA.
DR   AlphaFoldDB; O81103; -.
DR   SMR; O81103; -.
DR   GO; GO:0009543; C:chloroplast thylakoid lumen; IEA:UniProtKB-SubCell.
DR   GO; GO:0004097; F:catechol oxidase activity; IDA:UniProtKB.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0046148; P:pigment biosynthetic process; IEA:InterPro.
DR   Gene3D; 1.10.1280.10; -; 1.
DR   InterPro; IPR008922; Di-copper_centre_dom_sf.
DR   InterPro; IPR016213; Polyphenol_oxidase.
DR   InterPro; IPR022740; Polyphenol_oxidase_C.
DR   InterPro; IPR022739; Polyphenol_oxidase_cen.
DR   InterPro; IPR002227; Tyrosinase_Cu-bd.
DR   Pfam; PF12142; PPO1_DWL; 1.
DR   Pfam; PF12143; PPO1_KFDV; 1.
DR   Pfam; PF00264; Tyrosinase; 1.
DR   PIRSF; PIRSF000290; PPO_plant; 1.
DR   PRINTS; PR00092; TYROSINASE.
DR   SUPFAM; SSF48056; SSF48056; 1.
DR   PROSITE; PS00497; TYROSINASE_1; 1.
DR   PROSITE; PS00498; TYROSINASE_2; 1.
PE   1: Evidence at protein level;
KW   Chloroplast; Copper; Direct protein sequencing; Disulfide bond;
KW   Metal-binding; Oxidoreductase; Plastid; Thioether bond; Thylakoid;
KW   Transit peptide.
FT   TRANSIT         1..49
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000305|PubMed:10198084"
FT   TRANSIT         50..101
FT                   /note="Thylakoid"
FT                   /evidence="ECO:0000305|PubMed:10198084"
FT   CHAIN           102..597
FT                   /note="Polyphenol oxidase latent form, chloroplastic"
FT                   /id="PRO_0000443297"
FT   CHAIN           102..429
FT                   /note="Polyphenol oxidase active form, chloroplastic"
FT                   /id="PRO_0000443298"
FT   REGION          49..70
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        49..68
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         188
FT                   /ligand="Cu cation"
FT                   /ligand_id="ChEBI:CHEBI:23378"
FT                   /ligand_label="A"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   BINDING         209
FT                   /ligand="Cu cation"
FT                   /ligand_id="ChEBI:CHEBI:23378"
FT                   /ligand_label="A"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   BINDING         218
FT                   /ligand="Cu cation"
FT                   /ligand_id="ChEBI:CHEBI:23378"
FT                   /ligand_label="A"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   BINDING         341
FT                   /ligand="Cu cation"
FT                   /ligand_id="ChEBI:CHEBI:23378"
FT                   /ligand_label="B"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   BINDING         345
FT                   /ligand="Cu cation"
FT                   /ligand_id="ChEBI:CHEBI:23378"
FT                   /ligand_label="B"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   BINDING         375
FT                   /ligand="Cu cation"
FT                   /ligand_id="ChEBI:CHEBI:23378"
FT                   /ligand_label="B"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   SITE            429..430
FT                   /note="Cleavage"
FT                   /evidence="ECO:0000269|PubMed:28812349"
FT   DISULFID        112..128
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   DISULFID        127..189
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
FT   CROSSLNK        192..209
FT                   /note="2'-(S-cysteinyl)-histidine (Cys-His)"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZP19"
SQ   SEQUENCE   597 AA;  67133 MW;  1B0A0FC3B1E10208 CRC64;
     MATAPSPTTM GTYSSLISTN SFSTFLPNKS QLSLSGKSKH YVARRSSISC KATNNNNSNN
     QNEQQEESSR LLGKLDRRNI LIGLGGLYGA TTLDRKPFAF ADPIAPPDLT TCKPAEITPG
     GSETVPCCPP VTTKIKTFKP DLSIPLRTSP AAHQVTDEYL AKFKKAQAAM RALPDDDPRS
     MVQQAKVHCA YCNGAYPQVG FTDNDIQVHF SWLFFPFHRM YLYFYERILG KLIDDPTFAL
     PYWNWDSPVG FPIPDIYTDT SSPLYDQYRN ADHQPPVLVD LSYGGKDDDV DEQTRIDENL
     AIMYRQMVSG AKTPDLFFGH AYRAGNLNTG KYPGTIENMP HNNIHIWVGD PSQTHQEDMG
     NFYSAGRDPL FYAHHANVDR MWNIWKTLGG KRKDITDTDW LDAEFLFYDE NAELVRVKVR
     DSLEPEKQLR YNYEPVSLPW LFTKPTARKT KNKTKAKVAA TQLTSKFPAT LVEVTTVEVA
     RPKPRKRSKK EKVDEEELLI IKDIEFEGTE AVKFDVFIND DAESLSRRDK SEFAGSFVHV
     PQGKTTKAKT KTNLKLGITD LLEDLGAEDD SSVLVTLVPR VSNSPITIGG FKIEYSS
 
 
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