PPR26_ARATH
ID PPR26_ARATH Reviewed; 607 AA.
AC O04491;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1997, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At1g09680;
GN OrderedLocusNames=At1g09680; ORFNames=F21M12.7;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC000132; AAB60724.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE28479.1; -; Genomic_DNA.
DR PIR; F86230; F86230.
DR RefSeq; NP_172439.1; NM_100840.2.
DR AlphaFoldDB; O04491; -.
DR SMR; O04491; -.
DR STRING; 3702.AT1G09680.1; -.
DR PaxDb; O04491; -.
DR PRIDE; O04491; -.
DR ProteomicsDB; 236655; -.
DR EnsemblPlants; AT1G09680.1; AT1G09680.1; AT1G09680.
DR GeneID; 837496; -.
DR Gramene; AT1G09680.1; AT1G09680.1; AT1G09680.
DR KEGG; ath:AT1G09680; -.
DR Araport; AT1G09680; -.
DR TAIR; locus:2024367; AT1G09680.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR InParanoid; O04491; -.
DR OMA; EACAFYL; -.
DR OrthoDB; 1344243at2759; -.
DR PhylomeDB; O04491; -.
DR PRO; PR:O04491; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; O04491; baseline and differential.
DR Genevisible; O04491; AT.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR Gene3D; 1.25.40.10; -; 4.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 3.
DR TIGRFAMs; TIGR00756; PPR; 9.
DR PROSITE; PS51375; PPR; 9.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..607
FT /note="Putative pentatricopeptide repeat-containing protein
FT At1g09680"
FT /id="PRO_0000342767"
FT REPEAT 239..273
FT /note="PPR 1"
FT REPEAT 274..308
FT /note="PPR 2"
FT REPEAT 309..343
FT /note="PPR 3"
FT REPEAT 344..378
FT /note="PPR 4"
FT REPEAT 379..413
FT /note="PPR 5"
FT REPEAT 414..448
FT /note="PPR 6"
FT REPEAT 449..483
FT /note="PPR 7"
FT REPEAT 484..518
FT /note="PPR 8"
FT REPEAT 519..553
FT /note="PPR 9"
SQ SEQUENCE 607 AA; 68547 MW; 8D7F156523988227 CRC64;
MFRIEILRCT LSQSHPQRFS RASFLLSTWY SQESVSAADN DDDPVLVKLS VAIRDSYKDP
PLEFSSFTDC PSIRKVLPSL SVHHVVDLIN HNPLSLPQRS IFAFFKFISS QPGFRFTVET
YFVLARFLAV HEMFTEAQSL IELVVSRKGK NSASSVFISL VEMRVTPMCG FLVDALMITY
TDLGFIPDAI QCFRLSRKHR FDVPIRGCGN LLDRMMKLNP TGTIWGFYME ILDAGFPLNV
YVFNILMNKF CKEGNISDAQ KVFDEITKRS LQPTVVSFNT LINGYCKVGN LDEGFRLKHQ
MEKSRTRPDV FTYSALINAL CKENKMDGAH GLFDEMCKRG LIPNDVIFTT LIHGHSRNGE
IDLMKESYQK MLSKGLQPDI VLYNTLVNGF CKNGDLVAAR NIVDGMIRRG LRPDKITYTT
LIDGFCRGGD VETALEIRKE MDQNGIELDR VGFSALVCGM CKEGRVIDAE RALREMLRAG
IKPDDVTYTM MMDAFCKKGD AQTGFKLLKE MQSDGHVPSV VTYNVLLNGL CKLGQMKNAD
MLLDAMLNIG VVPDDITYNT LLEGHHRHAN SSKRYIQKPE IGIVADLASY KSIVNELDRA
SKDHRNR
