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PPR30_ARATH
ID   PPR30_ARATH             Reviewed;         467 AA.
AC   Q9SY75;
DT   01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   03-AUG-2022, entry version 108.
DE   RecName: Full=Putative pentatricopeptide repeat-containing protein At1g10330;
GN   Name=PCMP-E71; OrderedLocusNames=At1g10330; ORFNames=F14N23.21;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AC005489; AAD32883.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE28566.1; -; Genomic_DNA.
DR   PIR; D86237; D86237.
DR   RefSeq; NP_172504.1; NM_100907.2.
DR   AlphaFoldDB; Q9SY75; -.
DR   SMR; Q9SY75; -.
DR   PaxDb; Q9SY75; -.
DR   PRIDE; Q9SY75; -.
DR   EnsemblPlants; AT1G10330.1; AT1G10330.1; AT1G10330.
DR   GeneID; 837572; -.
DR   Gramene; AT1G10330.1; AT1G10330.1; AT1G10330.
DR   KEGG; ath:AT1G10330; -.
DR   Araport; AT1G10330; -.
DR   TAIR; locus:2012858; AT1G10330.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_6_1; -.
DR   InParanoid; Q9SY75; -.
DR   OMA; LQPQHCG; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q9SY75; -.
DR   PRO; PR:Q9SY75; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9SY75; baseline and differential.
DR   Genevisible; Q9SY75; AT.
DR   Gene3D; 1.25.40.10; -; 3.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 1.
DR   Pfam; PF13041; PPR_2; 3.
DR   TIGRFAMs; TIGR00756; PPR; 5.
DR   PROSITE; PS51375; PPR; 8.
PE   3: Inferred from homology;
KW   Reference proteome; Repeat.
FT   CHAIN           1..467
FT                   /note="Putative pentatricopeptide repeat-containing protein
FT                   At1g10330"
FT                   /id="PRO_0000342771"
FT   REPEAT          50..84
FT                   /note="PPR 1"
FT   REPEAT          85..119
FT                   /note="PPR 2"
FT   REPEAT          120..150
FT                   /note="PPR 3"
FT   REPEAT          151..181
FT                   /note="PPR 4"
FT   REPEAT          182..216
FT                   /note="PPR 5"
FT   REPEAT          220..256
FT                   /note="PPR 6"
FT   REPEAT          257..287
FT                   /note="PPR 7"
FT   REPEAT          288..322
FT                   /note="PPR 8"
FT   REPEAT          323..358
FT                   /note="PPR 9"
FT   REPEAT          359..389
FT                   /note="PPR 10"
FT   REGION          394..467
FT                   /note="Type E motif; degenerate"
SQ   SEQUENCE   467 AA;  51431 MW;  80C19EF2E1813AF0 CRC64;
     MRCTSFSSFS LSLEDALHLL QRFLYSSNQI KQIHTVLLTS NALVASRWKT KCVYNTLIRS
     YLTTGEYKTS LALFTHMLAS HVQPNNLTFP SLIKAACSSF SVSYGVALHG QALKRGFLWD
     PFVQTSFVRF YGEVGDLESS RKMFDDILNP CVVACNSLLD ACGRNGEMDY AFEYFQRMPV
     TDVVSWTTVI NGFSKKGLHA KALMVFGEMI QNERAVITPN EATFVSVLSS CANFDQGGIR
     LGKQIHGYVM SKEIILTTTL GTALLDMYGK AGDLEMALTI FDQIRDKKVC AWNAIISALA
     SNGRPKQALE MFEMMKSSYV HPNGITLLAI LTACARSKLV DLGIQLFSSI CSEYKIIPTS
     EHYGCVVDLI GRAGLLVDAA NFIQSLPFEP DASVLGALLG ACKIHENTEL GNTVGKQLIG
     LQPQHCGQYV ALSTFNALDS NWSEAEKMRK AMIEAGIRKI PAYSVLT
 
 
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