ID   PPR35_ARATH             Reviewed;         367 AA.
AC   Q5BIV3; O65392;
DT   01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT   12-APR-2005, sequence version 1.
DT   03-AUG-2022, entry version 95.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At1g11900;
GN   OrderedLocusNames=At1g11900; ORFNames=F12F1.26;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAC17629.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AC002131; AAC17629.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002684; AEE28810.1; -; Genomic_DNA.
DR   EMBL; BT021121; AAX22256.1; -; mRNA.
DR   PIR; D86253; D86253.
DR   RefSeq; NP_172654.2; NM_101061.3.
DR   AlphaFoldDB; Q5BIV3; -.
DR   SMR; Q5BIV3; -.
DR   PaxDb; Q5BIV3; -.
DR   PRIDE; Q5BIV3; -.
DR   ProteomicsDB; 226215; -.
DR   EnsemblPlants; AT1G11900.1; AT1G11900.1; AT1G11900.
DR   GeneID; 837738; -.
DR   Gramene; AT1G11900.1; AT1G11900.1; AT1G11900.
DR   KEGG; ath:AT1G11900; -.
DR   Araport; AT1G11900; -.
DR   TAIR; locus:2008955; AT1G11900.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_10_0_1; -.
DR   InParanoid; Q5BIV3; -.
DR   OMA; FAKVFRY; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q5BIV3; -.
DR   PRO; PR:Q5BIV3; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q5BIV3; baseline and differential.
DR   Genevisible; Q5BIV3; AT.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF13041; PPR_2; 2.
DR   TIGRFAMs; TIGR00756; PPR; 4.
DR   PROSITE; PS51375; PPR; 6.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..367
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At1g11900"
FT                   /id="PRO_0000342776"
FT   REPEAT          69..103
FT                   /note="PPR 1"
FT   REPEAT          104..139
FT                   /note="PPR 2"
FT   REPEAT          141..175
FT                   /note="PPR 3"
FT   REPEAT          176..210
FT                   /note="PPR 4"
FT   REPEAT          211..241
FT                   /note="PPR 5"
FT   REPEAT          247..281
FT                   /note="PPR 6"
FT   REPEAT          282..316
FT                   /note="PPR 7"
FT   REPEAT          317..347
FT                   /note="PPR 8"
SQ   SEQUENCE   367 AA;  41622 MW;  45377F353558D2DC CRC64;
     MMKWSIVKRI PVYGGSFISM KHMMLVPADL SWSCSFSGMH SLINTGEEDE EELLKKIVNH
     SESGSKIISK IDYTNLVEKF TRDGNLSGAY DLLQSLQEKN ICLPISVFKN LLAAAGELND
     MKLSCRVFRE VLILPGKEPL SSDCYLNLAR AFINTDDCTY LTSLLKEISE SSLPYRLIVM
     NRIIFAFAET RQIDKVLMIL KEMKEWECKP DVITYNSVLD ILGRAGLVNE ILGVLSTMKE
     DCSVSVNIIT YNTVLNGMRK ACRFDMCLVI YNEMVQCGIE PDLLSYTAVI DSLGRSGNVK
     ESLRLFDEMK QRQIRPSVYV YRALIDCLKK SGDFQSALQL SDELKNTSSL DLAGPQDFKR
     HLRSHRR