ID   PPR36_ARATH             Reviewed;         637 AA.
AC   Q0WKV3; Q9LNB4;
DT   01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT   05-SEP-2006, sequence version 1.
DT   03-AUG-2022, entry version 95.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At1g12300, mitochondrial;
DE   Flags: Precursor;
GN   OrderedLocusNames=At1g12300; ORFNames=F5O11.4;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAF79658.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g12300 and At1g12310.; Evidence={ECO:0000305};
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AC025416; AAF79658.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002684; AEE28864.1; -; Genomic_DNA.
DR   EMBL; AK230459; BAF02254.1; -; mRNA.
DR   PIR; A86258; A86258.
DR   RefSeq; NP_172694.1; NM_101102.3.
DR   AlphaFoldDB; Q0WKV3; -.
DR   SMR; Q0WKV3; -.
DR   STRING; 3702.AT1G12300.1; -.
DR   iPTMnet; Q0WKV3; -.
DR   PaxDb; Q0WKV3; -.
DR   PRIDE; Q0WKV3; -.
DR   ProteomicsDB; 226331; -.
DR   EnsemblPlants; AT1G12300.1; AT1G12300.1; AT1G12300.
DR   GeneID; 837784; -.
DR   Gramene; AT1G12300.1; AT1G12300.1; AT1G12300.
DR   KEGG; ath:AT1G12300; -.
DR   Araport; AT1G12300; -.
DR   TAIR; locus:2034760; AT1G12300.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_12_1; -.
DR   InParanoid; Q0WKV3; -.
DR   OMA; MINKCIE; -.
DR   OrthoDB; 1344243at2759; -.
DR   PhylomeDB; Q0WKV3; -.
DR   PRO; PR:Q0WKV3; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q0WKV3; baseline and differential.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IDA:TAIR.
DR   GO; GO:0090615; P:mitochondrial mRNA processing; IMP:TAIR.
DR   Gene3D; 1.25.40.10; -; 7.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   Pfam; PF01535; PPR; 1.
DR   Pfam; PF12854; PPR_1; 2.
DR   Pfam; PF13041; PPR_2; 5.
DR   TIGRFAMs; TIGR00756; PPR; 13.
DR   PROSITE; PS51375; PPR; 15.
PE   2: Evidence at transcript level;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..95
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           96..637
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At1g12300, mitochondrial"
FT                   /id="PRO_0000342777"
FT   REPEAT          87..121
FT                   /note="PPR 1"
FT   REPEAT          122..156
FT                   /note="PPR 2"
FT   REPEAT          157..191
FT                   /note="PPR 3"
FT   REPEAT          192..226
FT                   /note="PPR 4"
FT   REPEAT          227..261
FT                   /note="PPR 5"
FT   REPEAT          262..296
FT                   /note="PPR 6"
FT   REPEAT          297..331
FT                   /note="PPR 7"
FT   REPEAT          332..366
FT                   /note="PPR 8"
FT   REPEAT          367..401
FT                   /note="PPR 9"
FT   REPEAT          402..436
FT                   /note="PPR 10"
FT   REPEAT          437..471
FT                   /note="PPR 11"
FT   REPEAT          472..506
FT                   /note="PPR 12"
FT   REPEAT          507..541
FT                   /note="PPR 13"
FT   REPEAT          542..576
FT                   /note="PPR 14"
FT   REPEAT          577..611
FT                   /note="PPR 15"
SQ   SEQUENCE   637 AA;  71478 MW;  4DFD206C233527E2 CRC64;
     MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL
     RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK TKQYDLVLAL CKQMELKGIA
     HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL
     VDRMVEMGHK PDLITINTLV NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK
     SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
     YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI
     HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD PNIRTFNILI NGYCKANRID
     DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL
     DGLCDNGESE KALEIFEKIE KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK
     PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
     IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS