PPR72_ARATH
ID PPR72_ARATH Reviewed; 257 AA.
AC Q9C545;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Putative pentatricopeptide repeat-containing protein At1g43010;
GN OrderedLocusNames=At1g43010; ORFNames=F13A11.14, F2H10.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC026757; AAG50822.1; -; Genomic_DNA.
DR EMBL; AC068324; AAG51513.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31938.1; -; Genomic_DNA.
DR PIR; F96497; F96497.
DR RefSeq; NP_175000.1; NM_103460.1.
DR AlphaFoldDB; Q9C545; -.
DR SMR; Q9C545; -.
DR STRING; 3702.AT1G43010.1; -.
DR PaxDb; Q9C545; -.
DR PRIDE; Q9C545; -.
DR EnsemblPlants; AT1G43010.1; AT1G43010.1; AT1G43010.
DR GeneID; 840900; -.
DR Gramene; AT1G43010.1; AT1G43010.1; AT1G43010.
DR KEGG; ath:AT1G43010; -.
DR Araport; AT1G43010; -.
DR TAIR; locus:2009849; AT1G43010.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_060019_0_0_1; -.
DR OMA; SDLRCII; -.
DR OrthoDB; 1353251at2759; -.
DR PhylomeDB; Q9C545; -.
DR PRO; PR:Q9C545; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C545; baseline and differential.
DR Genevisible; Q9C545; AT.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF01535; PPR; 1.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..257
FT /note="Putative pentatricopeptide repeat-containing protein
FT At1g43010"
FT /id="PRO_0000342813"
FT REPEAT 133..168
FT /note="PPR 1"
FT REPEAT 169..203
FT /note="PPR 2"
SQ SEQUENCE 257 AA; 29727 MW; 42327FA9616F29D9 CRC64;
MGKAQIIQHQ ARRILSQSNR NCLFRRSYET LPAANQTLPS RIKTDINQKA SIIPLLEQWR
KQGYEVNPSH LRGLIKNLSD CKNFTTALEA SKWMFKHSVF DNFPEDCAAQ LHLVNTVLGL
EEAEKMFKNI PEKMRDYSVL LSSYTKPVRT VDKAEATFKK MRELGFLLKP YLFNSMICLY
GQLQRLDMVE KLLYKLKKNN MEVGSLKVNN VSRVYANINA MEKFKTWVSK EGIELERDTI
VAMAKAYHRA GSIEKAR