PPR95_ARATH
ID PPR95_ARATH Reviewed; 528 AA.
AC Q9LQ15;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Pentatricopeptide repeat-containing protein At1g62914, mitochondrial;
DE Flags: Precursor;
GN OrderedLocusNames=At1g62914; ORFNames=F16P17.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC011000; AAF75802.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE34021.1; -; Genomic_DNA.
DR PIR; G96653; G96653.
DR RefSeq; NP_001185295.1; NM_001198366.2.
DR AlphaFoldDB; Q9LQ15; -.
DR SMR; Q9LQ15; -.
DR PaxDb; Q9LQ15; -.
DR PRIDE; Q9LQ15; -.
DR ProteomicsDB; 234867; -.
DR EnsemblPlants; AT1G62914.1; AT1G62914.1; AT1G62914.
DR GeneID; 10723105; -.
DR Gramene; AT1G62914.1; AT1G62914.1; AT1G62914.
DR KEGG; ath:AT1G62914; -.
DR Araport; AT1G62914; -.
DR TAIR; locus:6530298165; AT1G62914.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; Q9LQ15; -.
DR OMA; CKTENTD; -.
DR OrthoDB; 1344243at2759; -.
DR PRO; PR:Q9LQ15; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LQ15; baseline and differential.
DR Genevisible; Q9LQ15; AT.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR Gene3D; 1.25.40.10; -; 5.
DR InterPro; IPR002885; Pentatricopeptide_repeat.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF13041; PPR_2; 6.
DR TIGRFAMs; TIGR00756; PPR; 12.
DR PROSITE; PS51375; PPR; 13.
PE 2: Evidence at transcript level;
KW Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT TRANSIT 1..20
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 21..528
FT /note="Pentatricopeptide repeat-containing protein
FT At1g62914, mitochondrial"
FT /id="PRO_0000342836"
FT REPEAT 77..111
FT /note="PPR 1"
FT REPEAT 112..146
FT /note="PPR 2"
FT REPEAT 147..181
FT /note="PPR 3"
FT REPEAT 182..216
FT /note="PPR 4"
FT REPEAT 217..251
FT /note="PPR 5"
FT REPEAT 252..286
FT /note="PPR 6"
FT REPEAT 287..321
FT /note="PPR 7"
FT REPEAT 322..356
FT /note="PPR 8"
FT REPEAT 357..391
FT /note="PPR 9"
FT REPEAT 392..426
FT /note="PPR 10"
FT REPEAT 427..461
FT /note="PPR 11"
FT REPEAT 462..496
FT /note="PPR 12"
FT REPEAT 497..528
FT /note="PPR 13"
SQ SEQUENCE 528 AA; 59336 MW; 31265C406F80F3BF CRC64;
MLAKISSSAK RFVHRSLVVR GNAATFPLSF SFCRRRAFSG KTSYDYREVL RTGLSDIELD
DAIGLFGVMA QSRPFPSIIE FSKLLSAIAK MNKFDLVISF GEKMEILGIS HNLYTYNILI
NCFCRCSRLS LALALLGKMM KLGYEPDIVT LNSLLNGFCH GNRISDAVAL VDQMVEMGYK
PDTVTFTTLI HGLFLHNKAS EAVALIDRMV QRGCQPDLVT YGAVVNGLCK RGDTDLALNL
LNKMEAAKIE ANVVIYSTVI DSLCKYRHED DALNLFTEME NKGVRPNVIT YSSLISCLCN
YGRWSDASRL LSDMIERKIN PNLVTFSALI DAFVKKGKLV KAEKLYEEMI KRSIDPNIFT
YSSLINGFCM LDRLGEAKQM LELMIRKDCL PNVVTYNTLI NGFCKAKRVD KGMELFREMS
QRGLVGNTVT YTTLIHGFFQ ARDCDNAQMV FKQMVSVGVH PNILTYNILL DGLCKNGKLA
KAMVVFEYLQ RSTMEPDIYT YNIMIEGMCK AGKWKMGGIY FVASALKE
