PPSA_PYRHO
ID PPSA_PYRHO Reviewed; 821 AA.
AC O57830;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 133.
DE RecName: Full=Probable phosphoenolpyruvate synthase;
DE Short=PEP synthase;
DE EC=2.7.9.2;
DE AltName: Full=Pyruvate, water dikinase;
GN Name=ppsA; OrderedLocusNames=PH0092;
OS Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC
OS 100139 / OT-3).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=70601;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3;
RX PubMed=9679194; DOI=10.1093/dnares/5.2.55;
RA Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S.,
RA Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K.,
RA Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T., Tanaka T.,
RA Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T.,
RA Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H.;
RT "Complete sequence and gene organization of the genome of a hyper-
RT thermophilic archaebacterium, Pyrococcus horikoshii OT3.";
RL DNA Res. 5:55-76(1998).
CC -!- FUNCTION: Catalyzes the phosphorylation of pyruvate to
CC phosphoenolpyruvate. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O + pyruvate = AMP + 2 H(+) + phosphate +
CC phosphoenolpyruvate; Xref=Rhea:RHEA:11364, ChEBI:CHEBI:15361,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:58702, ChEBI:CHEBI:456215; EC=2.7.9.2;
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC -!- PATHWAY: Carbohydrate biosynthesis; gluconeogenesis.
CC -!- DOMAIN: The N-terminal domain contains the ATP/Pi binding site, the
CC central domain the pyrophosphate/phosphate carrier histidine, and the
CC C-terminal domain the pyruvate binding site. {ECO:0000250}.
CC -!- MISCELLANEOUS: The reaction takes place in three steps, mediated by a
CC phosphocarrier histidine residue located on the surface of the central
CC domain. The two first partial reactions are catalyzed at an active site
CC located on the N-terminal domain, and the third partial reaction is
CC catalyzed at an active site located on the C-terminal domain. For
CC catalytic turnover, the central domain swivels from the concave surface
CC of the N-terminal domain to that of the C-terminal domain (By
CC similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the PEP-utilizing enzyme family. {ECO:0000305}.
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DR EMBL; BA000001; BAA29161.1; -; Genomic_DNA.
DR PIR; B71229; B71229.
DR AlphaFoldDB; O57830; -.
DR SMR; O57830; -.
DR STRING; 70601.3256478; -.
DR EnsemblBacteria; BAA29161; BAA29161; BAA29161.
DR KEGG; pho:PH0092; -.
DR eggNOG; arCOG01111; Archaea.
DR OMA; RRFVQMY; -.
DR UniPathway; UPA00138; -.
DR Proteomes; UP000000752; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008986; F:pyruvate, water dikinase activity; IEA:UniProtKB-EC.
DR GO; GO:0006094; P:gluconeogenesis; IEA:UniProtKB-UniPathway.
DR GO; GO:0016310; P:phosphorylation; IEA:UniProtKB-KW.
DR GO; GO:0006090; P:pyruvate metabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.60; -; 1.
DR Gene3D; 3.30.1490.20; -; 1.
DR InterPro; IPR013815; ATP_grasp_subdomain_1.
DR InterPro; IPR008279; PEP-util_enz_mobile_dom.
DR InterPro; IPR006319; PEP_synth.
DR InterPro; IPR018274; PEP_util_AS.
DR InterPro; IPR000121; PEP_util_C.
DR InterPro; IPR023151; PEP_util_CS.
DR InterPro; IPR036637; Phosphohistidine_dom_sf.
DR InterPro; IPR002192; PPDK_AMP/ATP-bd.
DR InterPro; IPR015813; Pyrv/PenolPyrv_Kinase-like_dom.
DR InterPro; IPR040442; Pyrv_Kinase-like_dom_sf.
DR PANTHER; PTHR43030; PTHR43030; 2.
DR Pfam; PF00391; PEP-utilizers; 1.
DR Pfam; PF02896; PEP-utilizers_C; 1.
DR Pfam; PF01326; PPDK_N; 1.
DR PIRSF; PIRSF000854; PEP_synthase; 1.
DR SUPFAM; SSF51621; SSF51621; 1.
DR SUPFAM; SSF52009; SSF52009; 1.
DR TIGRFAMs; TIGR01418; PEP_synth; 1.
DR PROSITE; PS00742; PEP_ENZYMES_2; 1.
DR PROSITE; PS00370; PEP_ENZYMES_PHOS_SITE; 1.
PE 3: Inferred from homology;
KW ATP-binding; Kinase; Magnesium; Metal-binding; Nucleotide-binding;
KW Transferase.
FT CHAIN 1..821
FT /note="Probable phosphoenolpyruvate synthase"
FT /id="PRO_0000147045"
FT ACT_SITE 444
FT /note="Tele-phosphohistidine intermediate"
FT /evidence="ECO:0000250"
FT ACT_SITE 759
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT BINDING 543
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 590
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 687
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 687
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 709
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 710
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 711
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 712
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 712
FT /ligand="substrate"
FT /evidence="ECO:0000250"
SQ SEQUENCE 821 AA; 90812 MW; A93816D865F8A0BF CRC64;
MDKMAYKFIK WFEELRKDDV PLVGGKGANL GEMTNAGIPV PPGFCVTAEA YKYFVENVKV
SKEDVKKILG EKANKGTIAE VLASAPDEPR TLQEWIMDII NRTNVDDSKQ LQENTAIIRE
LIESLEMPNE IADEIKQAYK ELSQRFGKDE IYVAVRSSAT AEDLPEASFA GQQETYLDVL
GADDVIDKVK KCWASLWTAR ATFYRAKQGF DHSKVYLSAV VQKMVNSEKS GVMFTANPVT
NNRNEIMINA SWGLGEAVVS GAVTPDEYIV EKGTWKIKEK VIAKKEVMVI RNPETGKGTV
QVKVAEYLGP EWVEKQVLTD EQIIEVAKMG QKIEEHYGWP QDIEWAYDKD DGKLYIVQSR
PITTLKETTT EEVEEVEEAE VILKGLGASP GIGAGRVVVI FDASEIDKVK EGDVLVTTMT
NPDMVPAMKR ASAIITDEGG RTSHAAIVSR ELGIPAVVGT KEATKKLKTG DYVTVDGTRG
LVYKGIVKSL VEKKKKEEAA AAPGAAVAAA PLVTGTLVKV NVSMPEVAER AAATGADGVG
LLRAEHMILS IGQHPVKFIK EGKEDELVER LAEGIEKVAA AFYPRPVWYR TLDAPTNEFR
EMPGGEDEPE ERNPMLGWRG IRRGLDQPEL LRAEFKAIKK VVEKGYNNIG VMLPLVSHPE
QIRKAKEIAR EVGLEPHKDV AWGIMIEVPA AAIIIEDLIK EGIDFVSFGT NDLTQYTLAI
DRDNERVAKL YDETHPAVLK LIKHVIKVCK KYGVETSICG QAGSDPKMAR ILVRLGIDSI
SANPDAVQLI RQVVAQEERK LMLEAARKKL LEEEEEEEDL F