PPSB_BACSU
ID PPSB_BACSU Reviewed; 2560 AA.
AC P39846;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=Plipastatin synthase subunit B;
DE EC=2.3.1.-;
DE AltName: Full=Peptide synthase 2;
DE Includes:
DE RecName: Full=ATP-dependent tyrosine adenylase 1;
DE Short=TyrA 1;
DE AltName: Full=Tyrosine activase 1;
DE Includes:
DE RecName: Full=ATP-dependent threonine adenylase;
DE Short=ThrA;
DE AltName: Full=Threonine activase;
GN Name=ppsB; Synonyms=pps2; OrderedLocusNames=BSU18330;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168;
RX PubMed=7711903; DOI=10.1099/13500872-141-3-645;
RA Tognoni A., Franchi E., Magistrelli C., Colombo E., Cosmina P., Grandi G.;
RT "A putative new peptide synthase operon in Bacillus subtilis: partial
RT characterization.";
RL Microbiology 141:645-648(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP FUNCTION IN PLIPASTATIN BIOSYNTHESIS.
RX PubMed=10471562; DOI=10.1128/aac.43.9.2183;
RA Tsuge K., Ano T., Hirai M., Nakamura Y., Shoda M.;
RT "The genes degQ, pps, and lpa-8 (sfp) are responsible for conversion of
RT Bacillus subtilis 168 to plipastatin production.";
RL Antimicrob. Agents Chemother. 43:2183-2192(1999).
CC -!- FUNCTION: This protein is a multifunctional enzyme, able to activate
CC and polymerize the amino acids Tyr and Thr as part of the biosynthesis
CC of the lipopeptide antibiotic plipastatin. The Thr residue is further
CC converted to the D-allo-isomer form. The activation sites for these
CC amino acids consist of individual domains.
CC {ECO:0000269|PubMed:10471562}.
CC -!- COFACTOR:
CC Name=pantetheine 4'-phosphate; Xref=ChEBI:CHEBI:47942;
CC Evidence={ECO:0000305};
CC Note=Binds 2 phosphopantetheines covalently. {ECO:0000305};
CC -!- SIMILARITY: Belongs to the ATP-dependent AMP-binding enzyme family.
CC {ECO:0000305}.
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DR EMBL; Z34883; CAA84361.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB13716.1; -; Genomic_DNA.
DR PIR; I40457; I40457.
DR RefSeq; NP_389715.1; NC_000964.3.
DR RefSeq; WP_003247155.1; NZ_JNCM01000027.1.
DR AlphaFoldDB; P39846; -.
DR SMR; P39846; -.
DR STRING; 224308.BSU18330; -.
DR PaxDb; P39846; -.
DR PRIDE; P39846; -.
DR EnsemblBacteria; CAB13716; CAB13716; BSU_18330.
DR GeneID; 939993; -.
DR KEGG; bsu:BSU18330; -.
DR PATRIC; fig|224308.179.peg.2000; -.
DR eggNOG; COG1020; Bacteria.
DR InParanoid; P39846; -.
DR OMA; LFDFWSH; -.
DR PhylomeDB; P39846; -.
DR BioCyc; BSUB:BSU18330-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0000036; F:acyl carrier activity; IBA:GO_Central.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0031177; F:phosphopantetheine binding; IBA:GO_Central.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 1.10.1200.10; -; 2.
DR Gene3D; 3.30.300.30; -; 2.
DR Gene3D; 3.30.559.10; -; 3.
DR InterPro; IPR010071; AA_adenyl_domain.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR023213; CAT-like_dom_sf.
DR InterPro; IPR001242; Condensatn.
DR InterPro; IPR010060; NRPS_synth.
DR InterPro; IPR020806; PKS_PP-bd.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR006162; Ppantetheine_attach_site.
DR Pfam; PF00501; AMP-binding; 2.
DR Pfam; PF13193; AMP-binding_C; 2.
DR Pfam; PF00668; Condensation; 3.
DR Pfam; PF00550; PP-binding; 2.
DR SMART; SM00823; PKS_PP; 2.
DR SUPFAM; SSF47336; SSF47336; 2.
DR TIGRFAMs; TIGR01733; AA-adenyl-dom; 2.
DR TIGRFAMs; TIGR01720; NRPS-para261; 1.
DR PROSITE; PS00455; AMP_BINDING; 2.
DR PROSITE; PS50075; CARRIER; 2.
DR PROSITE; PS00012; PHOSPHOPANTETHEINE; 1.
PE 1: Evidence at protein level;
KW Antibiotic biosynthesis; Ligase; Multifunctional enzyme;
KW Phosphopantetheine; Phosphoprotein; Reference proteome; Repeat;
KW Transferase.
FT CHAIN 1..2560
FT /note="Plipastatin synthase subunit B"
FT /id="PRO_0000193186"
FT DOMAIN 965..1040
FT /note="Carrier 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT DOMAIN 2006..2080
FT /note="Carrier 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 7..1042
FT /note="Domain 1 (tyrosine-activating)"
FT REGION 7..310
FT /note="Condensation 1"
FT REGION 496..889
FT /note="Adenylation 1"
FT REGION 1052..2553
FT /note="Domain 2 (D-allo-threonine-activating)"
FT REGION 1052..1342
FT /note="Condensation 2"
FT REGION 1527..1927
FT /note="Adenylation 2"
FT REGION 2088..2553
FT /note="Epimerization"
FT MOD_RES 1000
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 2041
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 2560 AA; 290165 MW; 2DD2442D11B6E942 CRC64;
MAQSAQIQDI YPLSHMQEGM LFHSLMDFSS KAYIEQTSFT ITGNLCVDSF QKSLNLLVSR
YDIFRTIFIK EVPDLTGPQQ VVLSNRELTV YREDISRLAD QEQQTLIDAF MTKDREKGFD
LQKDPLMRLA LFDRGDSQYT CVWTHHHIIM DGWCLGIILK EFFSMYDSLK NNSPVQLGST
VPYSRYIEWL GEQDQEETAA YWSEYLKEYG NTASIPRIKR RTADGNYKAD QVSFSLAPDM
VEKLTEAAQN WGVTLNTLFM SIWGVLLHRY NAADDAVFGS VISGRPSAID GIESMVGLFI
NTVPVRIRSA EGITFSSLVK AVQEDILSSE QHGYYPLYEI QNHSPLKQGL IDHIFVFENY
PVQLHQALSV ESENDEGALK LSDISMSEQT NYDFNIVIVP GESFYIKFSY NADVYEREEM
LRIQGHLKQA LDCILTNPDV AVSDINIVPP EEQQVIQLFN ETERPYVNKT IPQLFEEQAH
KTPEAAALKM GNECWTYRQL QVRANQIAHA LIEKGVGSGD IVAVMMGRSM EMPAALLGIW
KAGGAYMPLD PHFPAERLSF LLKDSQAAQL LIEEDLISLI PPSYEGNTIT IEHTESYQTE
APNMPPGDLA YLIYTSGTTG RPKGVLVDHH GIANTLQWRR EEYSMTEQDI SLHLFSYVFD
GCVTSLFTPL LSGACVLLTT DDEAKDVLAL KRKIARYKVS HMIIVPSLYR VLLEVMTADD
AKSLRIVTFA GEAVTPDLLE LNQIICPSAE LANEYGPTEN SVATTILRHL NKKERITIGH
PIRNTKVFVL HGNQMQPIGA AGELCISGAG LARGYYKQQE LTQKAFSDHP FLEGERLYRT
GDAGRFLPDG TIEYIGRFDD QVKIRGYRIE LREIETVLRQ APGVKEAAVL ARDVSAEEKE
LVAYIVPEKG NSLPDLYQHL AGTLPSYMIP ASIINISQMP LTSSGKLDRF ALPEPENNTS
VTYMAPRTLI EADLAHIWED VLNKQHIGIR DDFFQLGGQS LKAAALVSRI HKKLNVELPL
SEVFSYPTVE SMAVKLMSLK EHAFTQIEPA DQRDVYPLSF SQKRLYALHQ LADDSTGYNM
PAVLELRGNL NRQRLRSVLT ELVNRHEALR TVFVLDRDEP VQIIYPEMAF DLKELEMESE
QMLESAIETF IKPFYLSSGP LFRACVITMG NNRGFLLLDM HHIIADGVSM STLVQEFTDL
YCGKELPALN LHYKDFAVWQ QEKHPKELYK KQEAYWLGQL GGSLPTLELP LDKTRPRLPD
FRGGTIEVNI DKDMADELHR LMAETGTTLY MILLAVYSIL LSKLSGQEDI VVGSPAAGRP
HADLERVIGM FVNTLAMRSK PEGHKTFSSY LHDIRHLALT AYEHQDYPFE ELADKLDTNR
EVNRNPLFDA MLVLQSSEDF RFEVPGLSIS SVTPKHDISK FDLTLHAEEH LSGIRCRFEY
STALFEEETI TQWASYFIEL VKGVTADTEM RISNMQLLPA AERRLLLEKM GQYAAYPRNE
NIVSLFEKQV AQYPEHIAVV CGHSQLTYRD LNEKAERAAA MLIKQGVRTG DIVGLMLDRS
PDMIIGVLSI LKAGGAYLPI DPEYPKERIS FMLNDSGAKL LLTERGLNKP ADYTGHILYI
DECENNSIPA DVNIEEIVTD QPAYVIYTSG TTGQPKGVIV EHRNVISLLK HQNLPFEFNH
EDVWTLFHSY CFDFSVWEMF GALLNGSTLV VVSKETARDP QAFRLLLKKE RVTVLNQTPT
AFYGLMLEDQ NHTDHLNIRY VIFGGEALQP GLLQSWNEKY PHTDLINMYG ITETTVHVTF
KKLSAADIAK NKSNIGRPLS TLQAHVMDAH MNLQPTGVPG ELYIGGEGVA RGYLNRDELT
ADRFVSNPYL PGDRLYRTGD LAKRLSNGEL EYLGRIDEQV KVRGHRIELG EIQAALLQYP
MIKEAAVITR ADEQGQTAIY AYMVIKDQQA ANISDIRTYL KNALPDFMLP ARMIQIDSIP
VTVNGKLDQK ALPEPEKQAY TADDISPRNE IETVMAEIWE ELLNVDELGV SANFFKLGGD
SIKALQVCAR LKQRGFETTV REMFEHQTLG ELSARVRKDV RAIDQGPVEG EITWTPIQQW
FFSQSLESHH FNQSVMIYRA ERFDEAALRK VLKSLVTHHD ALRIVCRHED GRQVQINRGI
DLSDEELYAL ELFDVKDSLT EARNTIEEAA SRMQEHIRLE TGPLLHAGLF RTENGDHLFL
TIHHLVVDAV SWRILFEDFS TAYKQAVSGE SIKLPQKTDS YLTYSQRIAD YSISRQVQRE
AAYWDECENR HIQPIPKDND AASNTFKDTE VIDFELSRHH TELLLTAAHK AYSTEMNDIL
LTALGLALQK WTGNNQFKIS MEGHGRESYL EDIDISRTVG WFTSIYPVWL DMRDSDHKDK
EERLGHLIKQ TKDMLHRIPH KGAGYGVLKY ISKRWGSQKN SPEISFNYLG QFDQDIQSNA
FEVSDIKPGN EISPNWERPY ALDISGAVSS GCLNMHIIYN RFQFEEKTIQ TFSRHFKQTL
ENIIEHCTGK ENQEWSASDF TDEDLTLDEL SEIMGAVNKL