PRIN2_ORYSJ
ID PRIN2_ORYSJ Reviewed; 172 AA.
AC Q6H612;
DT 25-OCT-2017, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Protein PLASTID REDOX INSENSITIVE 2, chloroplastic {ECO:0000305};
DE Flags: Precursor;
GN Name=PRIN2 {ECO:0000305};
GN OrderedLocusNames=Os09g0382400 {ECO:0000312|EMBL:BAF24978.1},
GN LOC_Os09g21460 {ECO:0000305};
GN ORFNames=OsJ_29199 {ECO:0000312|EMBL:EEE69620.1},
GN P0505H05.24 {ECO:0000312|EMBL:BAD25837.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Required for the activity of the plastid-encoded RNA
CC polymerase (PEP) and full expression of genes transcribed by PEP.
CC {ECO:0000250|UniProtKB:B6UFC7}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma, chloroplast nucleoid
CC {ECO:0000250|UniProtKB:B6UFC7}.
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DR EMBL; AP005312; BAD25837.1; -; Genomic_DNA.
DR EMBL; AP008215; BAF24978.1; -; Genomic_DNA.
DR EMBL; AP014965; BAT07864.1; -; Genomic_DNA.
DR EMBL; CM000146; EEE69620.1; -; Genomic_DNA.
DR EMBL; AK062891; BAG88481.1; -; mRNA.
DR RefSeq; XP_015610957.1; XM_015755471.1.
DR AlphaFoldDB; Q6H612; -.
DR STRING; 4530.OS09T0382400-01; -.
DR PaxDb; Q6H612; -.
DR PRIDE; Q6H612; -.
DR EnsemblPlants; Os09t0382400-01; Os09t0382400-01; Os09g0382400.
DR GeneID; 4346938; -.
DR Gramene; Os09t0382400-01; Os09t0382400-01; Os09g0382400.
DR KEGG; osa:4346938; -.
DR eggNOG; ENOG502S2MJ; Eukaryota.
DR HOGENOM; CLU_101160_1_0_1; -.
DR InParanoid; Q6H612; -.
DR OMA; VKWAQSH; -.
DR OrthoDB; 1393473at2759; -.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000007752; Chromosome 9.
DR Proteomes; UP000059680; Chromosome 9.
DR GO; GO:0042644; C:chloroplast nucleoid; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0010468; P:regulation of gene expression; IEA:InterPro.
DR InterPro; IPR039349; PRIN2.
DR PANTHER; PTHR35987; PTHR35987; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; DNA-binding; Plastid; Reference proteome; Transcription;
KW Transcription regulation; Transit peptide.
FT TRANSIT 1..54
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 55..172
FT /note="Protein PLASTID REDOX INSENSITIVE 2, chloroplastic"
FT /id="PRO_0000441843"
SQ SEQUENCE 172 AA; 19349 MW; 2DB7C408E3727231 CRC64;
MAARLWAAAV APATLNPPLL TLSASSSPSS SRLRRSVLGR LRSRAPRPAD FVCRRAKNAA
YDDYKFPDPI PEFAAQETSK FKEHMMWRLE QKKDDYFGEH VEEIVDVCTE ILGTFLEHDY
CGPGTLLVHP FLDMKGEIKE RGLPGAPQAA RAAIAWAEKN IDKDWKAWTG EY