PRNL1_ARATH
ID PRNL1_ARATH Reviewed; 310 AA.
AC Q9LPS9; B3LFB5; Q9C6P9;
DT 01-JUN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 124.
DE RecName: Full=Pirin-like protein At1g50590;
GN OrderedLocusNames=At1g50590; ORFNames=F11F12.9, F17J6.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA De Los Reyes C., Quan R., Chen H., Bautista V.R., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the pirin family. {ECO:0000305}.
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DR EMBL; AC012561; AAF87876.1; -; Genomic_DNA.
DR EMBL; AC079279; AAG51187.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE32567.1; -; Genomic_DNA.
DR EMBL; BT033103; ACF16165.1; -; mRNA.
DR PIR; D96542; D96542.
DR RefSeq; NP_175474.1; NM_103941.2.
DR AlphaFoldDB; Q9LPS9; -.
DR SMR; Q9LPS9; -.
DR STRING; 3702.AT1G50590.1; -.
DR PaxDb; Q9LPS9; -.
DR PRIDE; Q9LPS9; -.
DR ProteomicsDB; 234807; -.
DR EnsemblPlants; AT1G50590.1; AT1G50590.1; AT1G50590.
DR GeneID; 841481; -.
DR Gramene; AT1G50590.1; AT1G50590.1; AT1G50590.
DR KEGG; ath:AT1G50590; -.
DR Araport; AT1G50590; -.
DR TAIR; locus:2008091; AT1G50590.
DR eggNOG; ENOG502QQ5A; Eukaryota.
DR HOGENOM; CLU_045717_5_2_1; -.
DR InParanoid; Q9LPS9; -.
DR OMA; RPHPHIN; -.
DR OrthoDB; 1328043at2759; -.
DR PhylomeDB; Q9LPS9; -.
DR PRO; PR:Q9LPS9; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LPS9; baseline and differential.
DR Genevisible; Q9LPS9; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.120.10; -; 2.
DR InterPro; IPR012093; Pirin.
DR InterPro; IPR008778; Pirin_C_dom.
DR InterPro; IPR003829; Pirin_N_dom.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR13903; PTHR13903; 1.
DR Pfam; PF02678; Pirin; 1.
DR Pfam; PF05726; Pirin_C; 1.
DR PIRSF; PIRSF006232; Pirin; 1.
DR SUPFAM; SSF51182; SSF51182; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..310
FT /note="Pirin-like protein At1g50590"
FT /id="PRO_0000214055"
FT CONFLICT 68..83
FT /note="Missing (in Ref. 1; AAG51187)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 310 AA; 34547 MW; 6C07034305B31782 CRC64;
MPISEKSSAT NTRLVVKKLF ARQLHEGFGA VVRRSIGRFE FRYFDPFLVL DEFSVSAPAG
FPDHPHRGFE TVTYMLEGEI LHEDCEGHKG VIREGGLQWM TAGKGIVHSE MPSSNSNGIT
HNKGLQLWIN LSSRQKLVEP SYQEIESKDI AETEKDGVRV RVIAGEWNGV KSKICTRTPT
MYLDFTLSPG SRISQPIPLH WNAFVYVLQG HGHFGDSKLQ HSAAAAHHLL VLGLGGDMLE
AWNGSDSGLP LRFILVAGEP IGEPMVQFGP FVMNTQEEID ETIDDFENFR NGFEKARHWK
SQAASALGLF