PRO28_ORYSJ
ID PRO28_ORYSJ Reviewed; 156 AA.
AC P20698; Q2QUA8; Q9ZWJ7;
DT 01-FEB-1991, integrated into UniProtKB/Swiss-Prot.
DT 13-JUN-2006, sequence version 2.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Prolamin PPROL 17D;
DE Flags: Precursor;
GN OrderedLocusNames=Os12g0269200, LOC_Os12g16890;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. M201; TISSUE=Seed;
RX PubMed=16666363; DOI=10.1104/pp.88.3.649;
RA Kim W.T., Okita T.W.;
RT "Structure, expression, and heterogeneity of the rice seed prolamines.";
RL Plant Physiol. 88:649-655(1988).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Mitsukawa N., Konishi R., Kidzu K., Ohtsuki K., Masumura T., Tanaka K.;
RT "Amino acid sequencing and cDNA cloning of major rice seed storage
RT proteins, the 13 kDa prolamins, extrtacted from PB-I protein bodies.";
RL Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=17565583; DOI=10.1111/j.1365-313x.2007.03136.x;
RA Silverstein K.A.T., Moskal W.A. Jr., Wu H.C., Underwood B.A., Graham M.A.,
RA Town C.D., VandenBosch K.A.;
RT "Small cysteine-rich peptides resembling antimicrobial peptides have been
RT under-predicted in plants.";
RL Plant J. 51:262-280(2007).
CC -!- FUNCTION: Seed storage protein; serves as a source of nitrogen, carbon
CC and sulfur for the young developing seedling.
CC -!- SUBCELLULAR LOCATION: Vacuole, aleurone grain. Note=In rice, prolamin
CC accumulates as a type I protein body which originates directly from the
CC endoplasmic reticulum.
CC -!- MISCELLANEOUS: Lacks significant tandem repetitive sequences.
CC -!- SIMILARITY: Belongs to the prolamin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA50423.1; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=AAA50423.1; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
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DR EMBL; M23745; AAA50423.1; ALT_SEQ; mRNA.
DR EMBL; AB016505; BAA36699.1; -; mRNA.
DR EMBL; DP000011; ABA97054.1; -; Genomic_DNA.
DR EMBL; AP008218; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP014968; BAT16637.1; -; Genomic_DNA.
DR PIR; JA0167; JA0167.
DR AlphaFoldDB; P20698; -.
DR IntAct; P20698; 2.
DR STRING; 4530.OS12T0269200-01; -.
DR PaxDb; P20698; -.
DR PRIDE; P20698; -.
DR EnsemblPlants; Os12t0269200-01; Os12t0269200-01; Os12g0269200.
DR Gramene; Os12t0269200-01; Os12t0269200-01; Os12g0269200.
DR HOGENOM; CLU_081977_1_1_1; -.
DR InParanoid; P20698; -.
DR OMA; FRCHAIH; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR ExpressionAtlas; P20698; baseline and differential.
DR Genevisible; P20698; OS.
DR GO; GO:0033095; C:aleurone grain; IEA:UniProtKB-SubCell.
DR GO; GO:0005773; C:vacuole; IEA:UniProtKB-KW.
DR GO; GO:0019863; F:IgE binding; IEA:UniProt.
DR GO; GO:0045735; F:nutrient reservoir activity; IEA:UniProtKB-KW.
DR CDD; cd00261; AAI_SS; 1.
DR Gene3D; 1.10.110.10; -; 1.
DR InterPro; IPR044723; AAI_SS_dom.
DR InterPro; IPR036312; Bifun_inhib/LTP/seed_sf.
DR InterPro; IPR016140; Bifunc_inhib/LTP/seed_store.
DR InterPro; IPR001954; Glia_glutenin.
DR PANTHER; PTHR33454; PTHR33454; 1.
DR Pfam; PF13016; Gliadin; 1.
DR PRINTS; PR00208; GLIADGLUTEN.
DR SMART; SM00499; AAI; 1.
DR SUPFAM; SSF47699; SSF47699; 1.
PE 2: Evidence at transcript level;
KW Pyrrolidone carboxylic acid; Reference proteome; Seed storage protein;
KW Signal; Storage protein; Vacuole.
FT SIGNAL 1..19
FT /evidence="ECO:0000255"
FT CHAIN 20..156
FT /note="Prolamin PPROL 17D"
FT /id="PRO_0000032266"
FT MOD_RES 20
FT /note="Pyrrolidone carboxylic acid"
FT /evidence="ECO:0000255"
SQ SEQUENCE 156 AA; 17562 MW; 1CF73D0C15D9000B CRC64;
MKIIFFFALL AIAACSASAQ FDAVTQVYRQ YQLQPHLMLQ QQMLSPCGEF VRQQCSTVAT
PFFQSPVFQL RNCQVMQQQC CQQLRMIAQQ SHCQAISSVQ AIVQQLRLQQ FASVYFDQSQ
AQAQAMLALN MPSICGIYPS YNTAPCSIPT VGGIWY
