PROF4_RAT
ID PROF4_RAT Reviewed; 129 AA.
AC Q5IRJ7;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Profilin-4;
DE AltName: Full=Profilin IV;
GN Name=Pfn4;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND
RP DEVELOPMENTAL STAGE.
RC STRAIN=Wistar; TISSUE=Testis;
RX PubMed=15591451; DOI=10.1093/molehr/gah132;
RA Obermann H., Raabe I., Balvers M., Brunswig B., Schulze W., Kirchhoff C.;
RT "Novel testis-expressed profilin IV associated with acrosome biogenesis and
RT spermatid elongation.";
RL Mol. Hum. Reprod. 11:53-64(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway;
RX PubMed=15057822; DOI=10.1038/nature02426;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D.,
RA Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L.,
RA Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D.,
RA Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M.,
RA Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C.,
RA Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J.,
RA Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H.,
RA Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X.,
RA Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q.,
RA Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P.,
RA Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A.,
RA Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C.,
RA Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J.,
RA Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F.,
RA Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A.,
RA Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A.,
RA Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J.,
RA Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E.,
RA Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C.,
RA Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L.,
RA Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W.,
RA Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y.,
RA Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V.,
RA Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M.,
RA Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S.,
RA Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B.,
RA Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R.,
RA Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J.,
RA Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D.,
RA Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S.,
RA Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S.,
RA Mockrin S., Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into mammalian
RT evolution.";
RL Nature 428:493-521(2004).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [5]
RP SUBCELLULAR LOCATION, AND DEVELOPMENTAL STAGE.
RX PubMed=19419568; DOI=10.1186/1471-2121-10-34;
RA Behnen M., Murk K., Kursula P., Cappallo-Obermann H., Rothkegel M.,
RA Kierszenbaum A.L., Kirchhoff C.;
RT "Testis-expressed profilins 3 and 4 show distinct functional
RT characteristics and localize in the acroplaxome-manchette complex in
RT spermatids.";
RL BMC Cell Biol. 10:34-34(2009).
CC -!- FUNCTION: Binds to phosphatidylinositol 3-phosphate (PtdIns(3)P),
CC phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2),
CC phosphatidylinositol 4-phosphate (PtdIns(4)P) and phosphatidic acid
CC (PA). Does not bind to actin, contrary to other family members (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000250}.
CC Note=Localizes first in the acroplaxome and later in the manchette
CC during spermatid head development. Localized mainly in the developing
CC acrosome of haploid germ cells. {ECO:0000269|PubMed:15591451,
CC ECO:0000269|PubMed:19419568}.
CC -!- TISSUE SPECIFICITY: Detected in seminiferous tubules (at protein
CC level). Detected in spermatocytes and spermatids. Not detected in
CC spermatogonium. {ECO:0000269|PubMed:15591451}.
CC -!- DEVELOPMENTAL STAGE: Expression coincides with the onset of meiosis.
CC Detected in nearly all stages of spermiogenesis (at protein level).
CC {ECO:0000269|PubMed:15591451, ECO:0000269|PubMed:19419568}.
CC -!- SIMILARITY: Belongs to the profilin family. {ECO:0000305}.
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DR EMBL; AY682392; AAV85168.1; -; mRNA.
DR EMBL; AABR06042656; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH473947; EDM03047.1; -; Genomic_DNA.
DR EMBL; BC107465; AAI07466.1; -; mRNA.
DR RefSeq; NP_001009503.1; NM_001009503.1.
DR AlphaFoldDB; Q5IRJ7; -.
DR SMR; Q5IRJ7; -.
DR STRING; 10116.ENSRNOP00000064666; -.
DR PaxDb; Q5IRJ7; -.
DR PRIDE; Q5IRJ7; -.
DR Ensembl; ENSRNOT00000074570; ENSRNOP00000064666; ENSRNOG00000050386.
DR GeneID; 494222; -.
DR KEGG; rno:494222; -.
DR CTD; 375189; -.
DR RGD; 1359707; Pfn4.
DR eggNOG; KOG1755; Eukaryota.
DR GeneTree; ENSGT00390000017067; -.
DR HOGENOM; CLU_120772_2_0_1; -.
DR InParanoid; Q5IRJ7; -.
DR OMA; VMPSDVQ; -.
DR OrthoDB; 1428600at2759; -.
DR PhylomeDB; Q5IRJ7; -.
DR PRO; PR:Q5IRJ7; -.
DR Proteomes; UP000002494; Chromosome 6.
DR Proteomes; UP000234681; Chromosome 6.
DR Bgee; ENSRNOG00000050386; Expressed in testis.
DR GO; GO:0005938; C:cell cortex; IBA:GO_Central.
DR GO; GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
DR GO; GO:0003785; F:actin monomer binding; IBA:GO_Central.
DR GO; GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
DR GO; GO:0042989; P:sequestering of actin monomers; IBA:GO_Central.
DR CDD; cd00148; PROF; 1.
DR InterPro; IPR005455; PFN.
DR InterPro; IPR036140; PFN_sf.
DR PANTHER; PTHR11604; PTHR11604; 1.
DR Pfam; PF00235; Profilin; 1.
DR SMART; SM00392; PROF; 1.
DR SUPFAM; SSF55770; SSF55770; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Cytoskeleton; Lipid-binding; Reference proteome.
FT CHAIN 1..129
FT /note="Profilin-4"
FT /id="PRO_0000423634"
SQ SEQUENCE 129 AA; 14421 MW; 44F9C0BC2D2D8E0A CRC64;
MSHLQNLLLD TLLGTKHVDG AALIKLQEKT LCVTSPGFSV MPCDVRTLLN GFAKNPLLTR
REGLYFREKD YKCVRADDCS LYAKKENTGV VVVKTHMYLL VATYTAGMYP SVCVEATEKL
GEYLRKKGN