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ATG2_AJECN
ID   ATG2_AJECN              Reviewed;        2105 AA.
AC   A6R6E3;
DT   05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   21-AUG-2007, sequence version 1.
DT   25-MAY-2022, entry version 54.
DE   RecName: Full=Autophagy-related protein 2;
GN   Name=ATG2; ORFNames=HCAG_05201;
OS   Ajellomyces capsulatus (strain NAm1 / WU24) (Darling's disease fungus)
OS   (Histoplasma capsulatum).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma;
OC   unclassified Histoplasma.
OX   NCBI_TaxID=2059318;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NAm1 / WU24;
RX   PubMed=19717792; DOI=10.1101/gr.087551.108;
RA   Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA   Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA   McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA   Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA   Henn M.R., Birren B.W., Taylor J.W.;
RT   "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT   and their relatives.";
RL   Genome Res. 19:1722-1731(2009).
CC   -!- FUNCTION: Lipid transfer protein required for autophagosome completion
CC       and peroxisome degradation. Tethers the edge of the isolation membrane
CC       (IM) to the endoplasmic reticulum (ER) and mediates direct lipid
CC       transfer from ER to IM for IM expansion. ATG2 binds to the ER exit site
CC       (ERES), which is the membrane source for autophagosome formation, using
CC       basic residues in its N-terminal region (NR) and to the expanding edge
CC       of the IM through its C-terminal region. The latter binding is assisted
CC       by an ATG18-PtdIns3P interaction. ATG2 then extracts phospholipids from
CC       the membrane source using its NR and transfers them to ATG9 to the IM
CC       through its predicted beta-sheet-rich structure for membrane expansion.
CC       {ECO:0000250|UniProtKB:P53855}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 1,2-diacyl-sn-glycero-3-phosphocholine(in) = a 1,2-diacyl-
CC         sn-glycero-3-phosphocholine(out); Xref=Rhea:RHEA:38571,
CC         ChEBI:CHEBI:57643; Evidence={ECO:0000250|UniProtKB:O94649};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 1,2-diacyl-sn-glycero-3-phospho-L-serine(in) = a 1,2-diacyl-
CC         sn-glycero-3-phospho-L-serine(out); Xref=Rhea:RHEA:38663,
CC         ChEBI:CHEBI:57262; Evidence={ECO:0000250|UniProtKB:O94649};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 1,2-diacyl-sn-glycero-3-phosphoethanolamine(in) = a 1,2-
CC         diacyl-sn-glycero-3-phosphoethanolamine(out); Xref=Rhea:RHEA:38895,
CC         ChEBI:CHEBI:64612; Evidence={ECO:0000250|UniProtKB:O94649};
CC   -!- SUBCELLULAR LOCATION: Preautophagosomal structure membrane
CC       {ECO:0000250|UniProtKB:P53855}; Peripheral membrane protein
CC       {ECO:0000250|UniProtKB:P53855}. Endoplasmic reticulum membrane
CC       {ECO:0000250|UniProtKB:P53855}; Peripheral membrane protein
CC       {ECO:0000250|UniProtKB:P53855}.
CC   -!- SIMILARITY: Belongs to the ATG2 family. {ECO:0000305}.
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DR   EMBL; CH476659; EDN08702.1; -; Genomic_DNA.
DR   RefSeq; XP_001539734.1; XM_001539684.1.
DR   AlphaFoldDB; A6R6E3; -.
DR   STRING; 339724.A6R6E3; -.
DR   EnsemblFungi; EDN08702; EDN08702; HCAG_05201.
DR   GeneID; 5446273; -.
DR   KEGG; aje:HCAG_05201; -.
DR   VEuPathDB; FungiDB:HCAG_05201; -.
DR   HOGENOM; CLU_000626_1_0_1; -.
DR   OMA; HRWDSTQ; -.
DR   OrthoDB; 54301at2759; -.
DR   Proteomes; UP000009297; Unassembled WGS sequence.
DR   GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0034045; C:phagophore assembly site membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0030242; P:autophagy of peroxisome; IEA:InterPro.
DR   GO; GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   InterPro; IPR026849; ATG2.
DR   InterPro; IPR026885; ATG2_CAD_motif.
DR   InterPro; IPR026886; ATG2_fungi/plants.
DR   InterPro; IPR015412; Autophagy-rel_C.
DR   PANTHER; PTHR13190; PTHR13190; 2.
DR   PANTHER; PTHR13190:SF1; PTHR13190:SF1; 2.
DR   Pfam; PF13329; ATG2_CAD; 1.
DR   Pfam; PF09333; ATG_C; 1.
PE   3: Inferred from homology;
KW   Autophagy; Endoplasmic reticulum; Lipid transport; Membrane;
KW   Protein transport; Reference proteome; Transport.
FT   CHAIN           1..2105
FT                   /note="Autophagy-related protein 2"
FT                   /id="PRO_0000317801"
FT   REGION          108..199
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          312..384
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          432..538
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          573..650
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2086..2105
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        146..160
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        174..188
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        312..355
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        432..457
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        509..538
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        581..609
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        618..646
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   2105 AA;  230425 MW;  BC9877C6264F3F5A CRC64;
     MSYFLPSFFQ KRLLRYALSR LELVDTDALD LESLGITWGQ RSTFELRDIG LRLEKLSSVL
     QLPPSCKLTQ ATVSLIHVTI PADIYSSSIV VEVENVQVKL KLLSDDAASS GDDRELCRPF
     DELSNNPKAN DPHPPGSHSH DRSSEKSSIL PSTTDLAQSF LESEPKEEKA ELEAAISSQS
     QYSQCSDGLS DDGEEELGIG VEDGMSLPGF VAGFFQGVAD RLQLKVKDVV FKIDMEVGHD
     RTSNSPQDLT VDTVTAMFTI QNISIDSVVS PMEENPELKP GKRFISFSQI NLIFLADAGV
     FSNYSHFVPP SLKSPSVTHS TRSIHSKLSH SPLNVSSPAP TSSSSGSSLV MSRGTILDQP
     SLLEDRPSNH QLADSVYTDD GRFSDAGTEY EYGAGSYLDH TRPMTENHYD ENILDNPIYL
     DEAIRSNLAD EFQSSPPSIS DPTDPTDEPS GDTPRPRSPT SLPDDHMYHS MESSTHSTNH
     PSQHLEIPPV EYQPEFSEPS GDEIEVSDSD NVPCTQEPSR SGSSTPQRSH SESASVVEDL
     SKSKIFTHEE ATSIYMSVLS SISAGSLPDM PGGWESPKYE ASKRNVSSPS LAPSTDVEPT
     STTSEGTPKA KPLVQLENGE TRDTSHVLGS PLLSNPNQSG LTEAEIKSPS RSPDYIPRIA
     KRVFEIDKLA VWLPSLDPKI TKSQDVPTQN SPRNEFDHME TSTMSFTDSA TDEEPVSLSQ
     HLAFQQPRRE LIFSQSLHQL ASPEQDDTSV PGFYAGTILV DVPTITIEVD IACGWLLTMM
     GQRLVSTWNP TTQNEKCRSE SKHATILPLN LTLANCSIRF LEHLPIYRSA FNATSLHYNP
     EVSEIILRVT LSGINFKSSV RGDTSEFILN VTKLTFGHAS EDIISFDDGL KMRDSIRDDF
     HLKRGDISLS VLSTKGNTTV DLATLPVHFS FNLQRLDETL NWFGGLSTIL ELGNSISSTS
     TIKGGKVAAN QRPRGVHFEV DSSKARPLPV GSSGVNPIPW KINARMKGFV MTLQGDRCSL
     KLKTTAVKIF MFAPMEEDLD RLLLLLTPSK DRYGEDDDIM LDTLFRQRKQ GAVLRLTVGN
     LKADFPEPEM LRPLSSLGNE LAKLSTVTKY LPQDDRPGIL TLVLVQECSC GVALGGRIGD
     IEISLTGVEA AHVGIPSLMA ARVSTLVVSR NDDEELVGEA ANSQDETNIV ALPMIMARFI
     ADEMDPTVKI KLSNVRFEYT VPSIVAFLGL DNDMSAEDFA ANIANSVVNL AELKSQETTI
     HRLAESSMSS VSSRPSPVPS KLSITLRDCL VGLNPRKSPA RGIAVFTSAK FSGSLDKDVT
     LDACLEIQKA TVMIINDSRN VGTRGSSHTR TSSDSQSNQV QLLHGMGYVP VCYLSSAAVV
     VKVMQLDDNG EKSVDVEVRD DLLILETCAD STQTLITILN ELAPPSPPNK SLKYRTEVMP
     IDDMLSSFTG NAFETSPIRE VGNLSNSYPV DEKEGDLAEE LEYVSDFYPV TLESGKHDPG
     RNMHISGTSD ADDGLSGLAH GPKTLLESFY SEAHVSSSVS SLDFQEDHFA RKSAVGGTAH
     RWDSTYNTYA LTNDAKLHGS PLRVRVRDVH FIWNLFDGFD WQHTRDAISK AVKDVEAKAS
     EKFSRVGGRS SPQMGSEEDV IGDFLFNSIY IGIPSNRNPQ QLREDINAHI DDLASETGSF
     ATTTTMTDGS AATIKAPSKR SKKLRLNRSK RQKMTFELKG ISADLVVFPP GSGETQSSLD
     IRVNDLEIFD HVPSSNWRKF ATYMYDAGEK ENGTAELAAS EIILKATILP LRLHVDQDAL
     DFMTRFFEFK DDSAPADTSP TEQPFLQRVE VNAVRVRLDF KPKRVDYGSL RSGRTTEFMN
     FFVLEEADMV LRHVIIYGVS GFEKLGVTLN DIWMPDIKAN QLPGVLAGLA PIKSLVGVGS
     GFKDLVVIPM REYKKDGRIV RSIQKGALAF AKTTTNELVK LGAKLAIGTQ TVLQGTEDFL
     NAPGDVGSQR YVATTDDDSA DEEQQKQFSP YADQPVGVVQ GLRGAYASLE RDLLIARNAI
     VAVPGEVIES GSAQGAARAL LKRAPTVILR PAIGASKALG QTLLGAGNSL DPTNRRRVED
     KYKRH
 
 
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