PRP1_ARATH
ID PRP1_ARATH Reviewed; 335 AA.
AC Q9FZ35; Q9M7P1;
DT 03-OCT-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Proline-rich protein 1;
DE Short=AtPRP1;
DE AltName: Full=Protein ROOT HAIR SPECIFIC 7;
DE Flags: Precursor;
GN Name=PRP1; Synonyms=RHS7; OrderedLocusNames=At1g54970;
GN ORFNames=F14C21.50, T24C10.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia, and cv. Landsberg erecta;
RX PubMed=10594096; DOI=10.1104/pp.121.4.1081;
RA Fowler T.J., Bernhardt C., Tierney M.L.;
RT "Characterization and expression of four proline-rich cell wall protein
RT genes in Arabidopsis encoding two distinct subsets of multiple domain
RT proteins.";
RL Plant Physiol. 121:1081-1092(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP TISSUE SPECIFICITY.
RX PubMed=19448035; DOI=10.1104/pp.109.140905;
RA Won S.-K., Lee Y.-J., Lee H.-Y., Heo Y.-K., Cho M., Cho H.-T.;
RT "Cis-element- and transcriptome-based screening of root hair-specific genes
RT and their functional characterization in Arabidopsis.";
RL Plant Physiol. 150:1459-1473(2009).
CC -!- FUNCTION: May contribute to cell wall structure in root hairs.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Exclusively expressed in roots, especially in root
CC hairs. {ECO:0000269|PubMed:10594096, ECO:0000269|PubMed:19448035}.
CC -!- SIMILARITY: Belongs to the plant proline-rich protein superfamily.
CC ENOD12 family. {ECO:0000305}.
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DR EMBL; AF110985; AAF64548.1; -; Genomic_DNA.
DR EMBL; AC064840; AAG00882.1; -; Genomic_DNA.
DR EMBL; AC069144; AAG51112.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33168.1; -; Genomic_DNA.
DR PIR; B96591; B96591.
DR PIR; T52078; T52078.
DR RefSeq; NP_175895.1; NM_104371.2.
DR AlphaFoldDB; Q9FZ35; -.
DR STRING; 3702.AT1G54970.1; -.
DR PaxDb; Q9FZ35; -.
DR PRIDE; Q9FZ35; -.
DR ProteomicsDB; 226509; -.
DR EnsemblPlants; AT1G54970.1; AT1G54970.1; AT1G54970.
DR GeneID; 841938; -.
DR Gramene; AT1G54970.1; AT1G54970.1; AT1G54970.
DR KEGG; ath:AT1G54970; -.
DR Araport; AT1G54970; -.
DR TAIR; locus:2010990; AT1G54970.
DR eggNOG; ENOG502SDZ3; Eukaryota.
DR HOGENOM; CLU_071703_0_0_1; -.
DR InParanoid; Q9FZ35; -.
DR OMA; YSAPCLW; -.
DR OrthoDB; 1370614at2759; -.
DR PhylomeDB; Q9FZ35; -.
DR PRO; PR:Q9FZ35; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FZ35; baseline and differential.
DR Genevisible; Q9FZ35; AT.
DR GO; GO:0071944; C:cell periphery; IBA:GO_Central.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR InterPro; IPR040413; PRP1/PRP3.
DR PANTHER; PTHR33470:SF25; PTHR33470:SF25; 2.
PE 2: Evidence at transcript level;
KW Cell wall; Reference proteome; Repeat; Secreted; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..335
FT /note="Proline-rich protein 1"
FT /id="PRO_0000419272"
FT REPEAT 30..34
FT /note="1"
FT REPEAT 35..39
FT /note="2"
FT REPEAT 40..43
FT /note="3"
FT REPEAT 44..48
FT /note="4"
FT REPEAT 49..53
FT /note="5"
FT REPEAT 54..57
FT /note="6"
FT REPEAT 58..62
FT /note="7"
FT REPEAT 63..67
FT /note="8"
FT REPEAT 68..71
FT /note="9"
FT REPEAT 72..76
FT /note="10"
FT REPEAT 77..81
FT /note="11"
FT REPEAT 82..86
FT /note="12"
FT REPEAT 87..91
FT /note="13"
FT REPEAT 92..96
FT /note="14"
FT REPEAT 97..101
FT /note="15"
FT REPEAT 102..106
FT /note="16"
FT REPEAT 107..110
FT /note="17"
FT REPEAT 111..115
FT /note="18"
FT REPEAT 116..120
FT /note="19"
FT REPEAT 121..125
FT /note="20"
FT REPEAT 126..130
FT /note="21"
FT REPEAT 131..135
FT /note="22"
FT REPEAT 136..139
FT /note="23"
FT REPEAT 140..144
FT /note="24"
FT REPEAT 145..148
FT /note="25"
FT REPEAT 149..153
FT /note="26"
FT REPEAT 154..158
FT /note="27"
FT REPEAT 159..163
FT /note="28"
FT REPEAT 164..167
FT /note="29"
FT REPEAT 168..172
FT /note="30"
FT REPEAT 173..177
FT /note="31"
FT REPEAT 178..182
FT /note="32"
FT REPEAT 184..189
FT /note="33"
FT REPEAT 190..194
FT /note="34"
FT REPEAT 195..200
FT /note="35"
FT REPEAT 201..207
FT /note="36"
FT REPEAT 208..212
FT /note="37"
FT REPEAT 284..288
FT /note="38"
FT REPEAT 319..323
FT /note="39"
FT REGION 30..323
FT /note="39 X 5 AA approximate repeats"
FT CONFLICT 186
FT /note="S -> I (in Ref. 1; AAF64548)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 335 AA; 36517 MW; 0CABFEE812899B61 CRC64;
MAITRASFAI CILLSLATIA TADYYAPSSP PVYTSPVNKP TLPPPVYTPP VHKPTLPPPV
YTPPVHKPTL SPPVYTKPTL PPPAYTPPVY NKPTLPAPVY TPPVYKPTLS PPVYTKPTLL
PPVFKPTLSP PVYTKPTLSP TVYKPTLSPP VNNKPSLSPP VYKPTLSPPV YTKPTLPPPV
YKKSPSYSPP PPFAPKPTYT PPTKPYVPEI IKAVGGIILC KNGYETYPIQ GAKAKIVCSE
RGSYEKSKNE VVIYSDPTDF KGYFHVVLTH IKNLSNCRVK LYTSPVETCK NPTNVNKGLT
GVPFSMYSDK NLKLFNVGPF YFTAGSKAAP ATPRY
