PRP46_ASHGO
ID PRP46_ASHGO Reviewed; 425 AA.
AC Q75BY3;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2013, sequence version 2.
DT 25-MAY-2022, entry version 113.
DE RecName: Full=Pre-mRNA-splicing factor PRP46;
DE AltName: Full=Pre-mRNA-processing protein 46;
GN Name=PRP46; OrderedLocusNames=ACR137W;
OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
OS (Yeast) (Eremothecium gossypii).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Eremothecium.
OX NCBI_TaxID=284811;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056;
RX PubMed=15001715; DOI=10.1126/science.1095781;
RA Dietrich F.S., Voegeli S., Brachat S., Lerch A., Gates K., Steiner S.,
RA Mohr C., Poehlmann R., Luedi P., Choi S., Wing R.A., Flavier A.,
RA Gaffney T.D., Philippsen P.;
RT "The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces
RT cerevisiae genome.";
RL Science 304:304-307(2004).
RN [2]
RP GENOME REANNOTATION, AND SEQUENCE REVISION TO 64 AND 79.
RC STRAIN=ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056;
RX PubMed=23749448; DOI=10.1534/g3.112.002881;
RA Dietrich F.S., Voegeli S., Kuo S., Philippsen P.;
RT "Genomes of Ashbya fungi isolated from insects reveal four mating-type
RT loci, numerous translocations, lack of transposons, and distinct gene
RT duplications.";
RL G3 (Bethesda) 3:1225-1239(2013).
CC -!- FUNCTION: Involved in pre-mRNA splicing and required for cell cycle
CC progression at G2/M. {ECO:0000250}.
CC -!- SUBUNIT: Associated with the spliceosome. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the WD repeat PRL1/PRL2 family. {ECO:0000305}.
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DR EMBL; AE016816; AAS51363.2; -; Genomic_DNA.
DR RefSeq; NP_983539.2; NM_208892.2.
DR AlphaFoldDB; Q75BY3; -.
DR SMR; Q75BY3; -.
DR STRING; 33169.AAS51363; -.
DR EnsemblFungi; AAS51363; AAS51363; AGOS_ACR137W.
DR GeneID; 4619671; -.
DR KEGG; ago:AGOS_ACR137W; -.
DR eggNOG; KOG0285; Eukaryota.
DR HOGENOM; CLU_000288_72_0_1; -.
DR InParanoid; Q75BY3; -.
DR OMA; HPLEWKP; -.
DR Proteomes; UP000000591; Chromosome III.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0071014; C:post-mRNA release spliceosomal complex; IEA:EnsemblFungi.
DR GO; GO:0000974; C:Prp19 complex; IBA:GO_Central.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:EnsemblFungi.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR045241; Prp46/PLRG1-like.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR19923; PTHR19923; 1.
DR Pfam; PF00400; WD40; 4.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Cytoplasm; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Repeat; Spliceosome; WD repeat.
FT CHAIN 1..425
FT /note="Pre-mRNA-splicing factor PRP46"
FT /id="PRO_0000051159"
FT REPEAT 111..151
FT /note="WD 1"
FT REPEAT 154..193
FT /note="WD 2"
FT REPEAT 196..235
FT /note="WD 3"
FT REPEAT 238..279
FT /note="WD 4"
FT REPEAT 281..320
FT /note="WD 5"
FT REPEAT 322..360
FT /note="WD 6"
FT REPEAT 371..410
FT /note="WD 7"
SQ SEQUENCE 425 AA; 48021 MW; DE24F7D912F00485 CRC64;
MNEHSDDVYV RARLRNQFGY MTWVPEYVED RISSKKGILQ RYEDYQQKQA KAQEVKTDSL
VKYEGAKDVP RNLLRIYRGE ADTSALARYE EVVSQKPQWH APWKLTRVIN GHTGWVRCVC
VDPVDNAWFA TGSNDSTIRV WDLATGKLKV TLQGHIMTVR DICISARHPY MFSASQDKLV
KCWDLERNTV VRDFHGTLSG VHSVDLHPSL DLIVSAGRDS VVRVWDIRSR SCVLTLAGHR
GPINKVRCLP VDPQIVSCST DATVKLWDLV AGKPMKTLTH HKRNVRDLAF NPTEFSFASA
CTDDIRSWKL VDGQLLTNFN SEALGIVNTL ACNQDGVLFA GGDTGELSFF DYKTGHKFQK
LETTAMPGSL ESEKGVLAST FDRTGLRLLT CERDKSIKIW KHIDGATQDS HPGLPWNPSL
VRQRF