PRP5_ASPCL
ID PRP5_ASPCL Reviewed; 1192 AA.
AC A1CQA9;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5;
DE EC=3.6.4.13;
GN Name=prp5; ORFNames=ACLA_025470;
OS Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
OS NRRL 1 / QM 1276 / 107).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=344612;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1;
RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT fumigatus.";
RL PLoS Genet. 4:E1000046-E1000046(2008).
CC -!- FUNCTION: ATP-dependent RNA helicase involved spliceosome assembly and
CC in nuclear splicing. Catalyzes an ATP-dependent conformational change
CC of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP
CC association with intron RNA (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC family of RNA helicases and controls ATP binding and hydrolysis.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX46/PRP5
CC subfamily. {ECO:0000305}.
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DR EMBL; DS027059; EAW07830.1; -; Genomic_DNA.
DR RefSeq; XP_001269256.1; XM_001269255.1.
DR AlphaFoldDB; A1CQA9; -.
DR SMR; A1CQA9; -.
DR STRING; 5057.CADACLAP00002222; -.
DR PRIDE; A1CQA9; -.
DR EnsemblFungi; EAW07830; EAW07830; ACLA_025470.
DR GeneID; 4701879; -.
DR KEGG; act:ACLA_025470; -.
DR VEuPathDB; FungiDB:ACLA_025470; -.
DR eggNOG; KOG0334; Eukaryota.
DR HOGENOM; CLU_003041_0_3_1; -.
DR OMA; CGLGVQT; -.
DR OrthoDB; 245118at2759; -.
DR Proteomes; UP000006701; Unassembled WGS sequence.
DR GO; GO:0071004; C:U2-type prespliceosome; IEA:EnsemblFungi.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:EnsemblFungi.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:1990446; F:U1 snRNP binding; IEA:EnsemblFungi.
DR GO; GO:1990447; F:U2 snRNP binding; IEA:EnsemblFungi.
DR GO; GO:1903241; P:U2-type prespliceosome assembly; IEA:EnsemblFungi.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; mRNA processing; mRNA splicing;
KW Nucleotide-binding; Nucleus; Reference proteome.
FT CHAIN 1..1192
FT /note="Pre-mRNA-processing ATP-dependent RNA helicase prp5"
FT /id="PRO_0000282690"
FT DOMAIN 588..766
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 793..943
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 315..416
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 957..1003
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 557..585
FT /note="Q motif"
FT MOTIF 714..717
FT /note="DEAD box"
FT COMPBIAS 20..85
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..153
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..197
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 330..357
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 358..374
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 375..397
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 967..990
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 601..608
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 1192 AA; 131673 MW; 2CDE07E011185610 CRC64;
MARHGDTRSP SPVGSTYSSS RRSRRDDDRY EKSRREDGRG HRRSRSPERR YRDRDRDRES
YRRRDRSLDR RDDYRNDGGY RSNRRDRSRD RRRSRDRGDD RDHRRRSRDR DYRSRRDDSR
DKARRRTDDS ADLKHKSRRD DSRTRDLDSK SRDTSKPSTP APAAQTEDEK RAERLAKLEA
WKQKQAAEKE RKQREAAAAG GARSILEEID RKSGLSPAVG SPKSPVTPTT DATPAPYAGK
FDPKAIKRNA APTPSAPLVL GNDVAVPQIA KASATFSSMN NHAQANKPAA ALSTAPSTLK
SKRNVGGFGL GAKQVADAEK PSAVKTLGFG EEESTRKKLE RLPTPPLEDG KDETVAADMG
AEDEDDDMQD GETEEENAAA ARAAAERREE RLQNEALRAQ SSEKVPQTNG DVEMNDAPIQ
AEAENMEVDV EEEDVDPLDA FMSELAESAP PKKTFGTKFS KAKEQQPEAM FGDENDVDLT
AVGEGDADDF LAIANKAKKK KDIPTVNHEK VEYEPFRKKF YTEPSNLAQM TDEEAASLRL
ELDGIKVRGV DVPKPVQKWS QCGLGVQALD VIERLGYESP TSIQSQAIPA IMSGRDVIGV
AKTGSGKTVA FLIPMFRHIK DQRPLDNMEG PIGLIMTPTR ELATQIHKDC KPFLKALNLR
AVCAYGGAPI KDQIADLKRG AEIVVCTPGR MIDLLAANAG RVTNLRRVTY VVLDEADRMF
DMGFEPQVMK IMANIRPDRQ TVLFSATFPR NMEALARKAL TKPIEIIVGG RSVVAPEITQ
IVEVRNEDTK FVRLLEILGN LYSDDANEDA RSLIFVERQE AADALLRELM RKGYPCMSIH
GGKDQIDRDS TIEDFKAGIF PVLIATSVAA RGLDVKQLKL VVNYDAPNHL EDYVHRAGRT
GRAGNTGTAV TFLTEEQERY SVDIAKALKQ SGQQVPEPVQ KMVDSFLEKV KAGKEKASAS
GFGGKGLERL DQERDAARNR ERRTYKTGEE GEDEEEKEDK AEKADERFNK ALSSVQSAAA
AAPTLPGVPK GIDLDGKITV HRTEKDPAGT SKNPLDKVGS AVADIHARLS RAGVMRSGVP
IDNRGPDAGA YHATLEINDF PQKARWAVTN RTNVAKILEA TGTSITTKGS FYPPGKVPGP
NENAKLYILV EGETELAVTN AMRELMRLLK EGTIAAADSD ARAPVGGRYN VV