PRP5_ASPFU
ID PRP5_ASPFU Reviewed; 1211 AA.
AC Q4WT99;
DT 04-APR-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2005, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5;
DE EC=3.6.4.13;
GN Name=prp5; ORFNames=AFUA_1G10050;
OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC
OS A1100) (Aspergillus fumigatus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=330879;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100;
RX PubMed=16372009; DOI=10.1038/nature04332;
RA Nierman W.C., Pain A., Anderson M.J., Wortman J.R., Kim H.S., Arroyo J.,
RA Berriman M., Abe K., Archer D.B., Bermejo C., Bennett J.W., Bowyer P.,
RA Chen D., Collins M., Coulsen R., Davies R., Dyer P.S., Farman M.L.,
RA Fedorova N., Fedorova N.D., Feldblyum T.V., Fischer R., Fosker N.,
RA Fraser A., Garcia J.L., Garcia M.J., Goble A., Goldman G.H., Gomi K.,
RA Griffith-Jones S., Gwilliam R., Haas B.J., Haas H., Harris D.E.,
RA Horiuchi H., Huang J., Humphray S., Jimenez J., Keller N., Khouri H.,
RA Kitamoto K., Kobayashi T., Konzack S., Kulkarni R., Kumagai T., Lafton A.,
RA Latge J.-P., Li W., Lord A., Lu C., Majoros W.H., May G.S., Miller B.L.,
RA Mohamoud Y., Molina M., Monod M., Mouyna I., Mulligan S., Murphy L.D.,
RA O'Neil S., Paulsen I., Penalva M.A., Pertea M., Price C., Pritchard B.L.,
RA Quail M.A., Rabbinowitsch E., Rawlins N., Rajandream M.A., Reichard U.,
RA Renauld H., Robson G.D., Rodriguez de Cordoba S., Rodriguez-Pena J.M.,
RA Ronning C.M., Rutter S., Salzberg S.L., Sanchez M., Sanchez-Ferrero J.C.,
RA Saunders D., Seeger K., Squares R., Squares S., Takeuchi M., Tekaia F.,
RA Turner G., Vazquez de Aldana C.R., Weidman J., White O., Woodward J.R.,
RA Yu J.-H., Fraser C.M., Galagan J.E., Asai K., Machida M., Hall N.,
RA Barrell B.G., Denning D.W.;
RT "Genomic sequence of the pathogenic and allergenic filamentous fungus
RT Aspergillus fumigatus.";
RL Nature 438:1151-1156(2005).
CC -!- FUNCTION: ATP-dependent RNA helicase involved spliceosome assembly and
CC in nuclear splicing. Catalyzes an ATP-dependent conformational change
CC of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP
CC association with intron RNA (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC family of RNA helicases and controls ATP binding and hydrolysis.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX46/PRP5
CC subfamily. {ECO:0000305}.
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DR EMBL; AAHF01000004; EAL90333.1; -; Genomic_DNA.
DR RefSeq; XP_752371.1; XM_747278.1.
DR AlphaFoldDB; Q4WT99; -.
DR SMR; Q4WT99; -.
DR STRING; 746128.CADAFUBP00000929; -.
DR EnsemblFungi; EAL90333; EAL90333; AFUA_1G10050.
DR GeneID; 3510546; -.
DR KEGG; afm:AFUA_1G10050; -.
DR eggNOG; KOG0334; Eukaryota.
DR HOGENOM; CLU_003041_0_3_1; -.
DR InParanoid; Q4WT99; -.
DR OMA; CGLGVQT; -.
DR OrthoDB; 245118at2759; -.
DR Proteomes; UP000002530; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0071004; C:U2-type prespliceosome; IEA:EnsemblFungi.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:EnsemblFungi.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:1990446; F:U1 snRNP binding; IEA:EnsemblFungi.
DR GO; GO:1990447; F:U2 snRNP binding; IEA:EnsemblFungi.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR GO; GO:1903241; P:U2-type prespliceosome assembly; IEA:EnsemblFungi.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; mRNA processing; mRNA splicing;
KW Nucleotide-binding; Nucleus; Reference proteome.
FT CHAIN 1..1211
FT /note="Pre-mRNA-processing ATP-dependent RNA helicase prp5"
FT /id="PRO_0000232357"
FT DOMAIN 606..784
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 811..961
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..240
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 344..429
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 975..1023
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 575..603
FT /note="Q motif"
FT MOTIF 732..735
FT /note="DEAD box"
FT COMPBIAS 20..83
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 90..150
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 164..195
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 215..234
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 346..374
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 375..390
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 398..415
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 985..1008
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 619..626
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 1211 AA; 133782 MW; 206E86EE324B2C8A CRC64;
MARHGDTRSP SPVGSTYSSS RRSRRDDDRY EKSRRDDLRS YRRSRSPERR YRDRDRDSYR
RRDRSVDRRD DHRDEDSYRS SRRDRSRDRR RSRDRGDDRD HRRKSRERDY RSRRDDSRDR
ARRRTDDSAD LKHKSRRDDS RTRNLDSKPR EASKPSTPAP TAPTEDEKRA ERLAKLEAWK
QKQAAERERK QREAAAAGGA RSILEEIDRK SGLSPAVGSP QSPATPTTDA TPTPYSGKFD
PKAIVRNAAP APSTPAVLGN DVAVPQSAKA SASSSSMNNH VQANKHPAAN STTSCKLYIP
TIRFLQIANV TCTATSTVKR NVGGFGLGAK QVADAEKSSA VKTLGFGEEE SKRKKLERLP
TPPLEDAKDD MGAVDAAVED EDDVDMQDGG TEEENAAAAR AAAERREERL QSEALRAQSK
EAALQSNGDV EMNDVPHQAE SEKMEVDAAE EEVDPLDAFM SELAETAPPK KTTGARFTKA
KDQQPEAMFG DEHDVDLTAV GEGDADDFLA IANKAKKKKD IPTVDHEKME YEPFRKKFYT
EPSNLAEMTD EEAASLRLEL DGIKVRGVDV PKPVMKWSQC GLGVQTLDVI QKLGYENPTS
IQSQAIPAIM SGRDVIGVAK TGSGKTIAFL IPMFRHIRDQ RPLENMEGPI GLIMTPTREL
ATQIHKDCKP FLKALNLRAV CAYGGAPIKD QIAELKRGAE IVVCTPGRMI DLLAANAGRV
TNLRRVTYVV LDEADRMFDM GFEPQVMKIM ANIRPDRQTV LFSATFPRNM EALARKSLTK
PIEIVVGGKS VVAPEITQIV EVRNEDTKFV RLLEILGNLY SDDANEDARA LIFVDRQEAA
DTLLRELMRK GYPCMSIHGG KDQIDRDSTI EDFKAGIFPV LIATSVAARG LDVKQLKLVV
NYDAPNHLED YVHRAGRTGR AGNTGTAVTF LTEEQERYSV DIAKALRQSG QKVPEPVQKM
VDSFLEKVKA GKEKASASGF GGKGLERLDQ ERDAARMRER RTYKTGEEGE DEEDKEDKAE
KADERFSKIV SSVQSAAAAA TTPLPGVPKG IDLDGKITVH RTEKDPAGAS KNPLDKVGSA
VADIHARLSR AGVMRSGVPI DNRGPDAGAF HATLEINDFP QKARWAVTNR TNVAKILEAT
GTSITTKGSF YPAGKEPGPG ENPKLYILVE GETELAVTNA MRELMRLLKE GTLAAADSDA
RAPVGGRYNV V