PRP5_NEOFI
ID PRP5_NEOFI Reviewed; 1193 AA.
AC A1D373;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5;
DE EC=3.6.4.13;
GN Name=prp5; ORFNames=NFIA_015590;
OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164
OS / JCM 1740 / NRRL 181 / WB 181) (Aspergillus fischerianus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=331117;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181
RC / WB 181;
RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT fumigatus.";
RL PLoS Genet. 4:E1000046-E1000046(2008).
CC -!- FUNCTION: ATP-dependent RNA helicase involved spliceosome assembly and
CC in nuclear splicing. Catalyzes an ATP-dependent conformational change
CC of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP
CC association with intron RNA (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC family of RNA helicases and controls ATP binding and hydrolysis.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX46/PRP5
CC subfamily. {ECO:0000305}.
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DR EMBL; DS027688; EAW22866.1; -; Genomic_DNA.
DR RefSeq; XP_001264763.1; XM_001264762.1.
DR AlphaFoldDB; A1D373; -.
DR SMR; A1D373; -.
DR STRING; 36630.CADNFIAP00002011; -.
DR PRIDE; A1D373; -.
DR EnsemblFungi; EAW22866; EAW22866; NFIA_015590.
DR GeneID; 4591228; -.
DR KEGG; nfi:NFIA_015590; -.
DR VEuPathDB; FungiDB:NFIA_015590; -.
DR eggNOG; KOG0334; Eukaryota.
DR HOGENOM; CLU_003041_0_3_1; -.
DR OMA; CGLGVQT; -.
DR OrthoDB; 245118at2759; -.
DR Proteomes; UP000006702; Unassembled WGS sequence.
DR GO; GO:0071004; C:U2-type prespliceosome; IEA:EnsemblFungi.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:EnsemblFungi.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:1990446; F:U1 snRNP binding; IEA:EnsemblFungi.
DR GO; GO:1990447; F:U2 snRNP binding; IEA:EnsemblFungi.
DR GO; GO:1903241; P:U2-type prespliceosome assembly; IEA:EnsemblFungi.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; mRNA processing; mRNA splicing;
KW Nucleotide-binding; Nucleus; Reference proteome.
FT CHAIN 1..1193
FT /note="Pre-mRNA-processing ATP-dependent RNA helicase prp5"
FT /id="PRO_0000282693"
FT DOMAIN 588..766
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 793..943
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..236
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 326..426
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 957..1009
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 557..585
FT /note="Q motif"
FT MOTIF 714..717
FT /note="DEAD box"
FT COMPBIAS 20..83
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 90..150
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 164..195
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 215..229
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 328..356
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 357..372
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 380..397
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 967..990
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 601..608
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 1193 AA; 131584 MW; 8D14028FB265D984 CRC64;
MARHGDTRSP SPVGSTYSSS RRSRRDDDRY EKSRRDDGRS YRRSRSPERR YRDRDRDSYR
RRDRSIDRRD DHRDEDSYRP SRRDRSRDRR RSRDRGDDRD HRRKSRERDY RSRRDDSRDR
ARRRTDDSAD LKHKSRRDDS RTRNLDSKSR ETSKPSTPAP AAPTEDEKRA ERLAKLEAWK
QKQAAERERK QREAAAAGGA RSILEEIDRK SGLSPAVGSP QSPAATPTTD ATPAPYAGKF
DPKAIVRNAV PAPSTPAVLG NDVAVPQSAK ASASLSSMNN HVQANKPPAA ISTASSTLTV
KRNVGGFGLG ARQVADAEKS SAVKTLGFGE EESKRKKLER LPTPPLEDAK DDTGAVDAAV
EDEDDVDMQD GGTEEENAAA ARAAAERREE RLQSEALRAQ SKEAAPQPNG DVEMDDVSHQ
AESEKMEVDA AEEEVDPLDA FMSELAETAP PKKTTGARFA KAKEQQPEAM FGDEHDVDLT
AVGEGDADDF LAIANKAKKK KDIPAVDHEK MEYEPFRKKF YTEPSNLAEM TDEEAASLRL
ELDGIKVRGV DVPKPVMKWS QCGLGVQTLD VIHRLGYENP TSIQSQAIPA IMSGRDVIGV
AKTGSGKTIA FLIPMFRHIR DQRPLENMEG PIGLIMTPTR ELATQIHKDC KPFLKALNLR
AVCAYGGAPI KDQIAELKRG AEIVVCTPGR MIDLLAANAG RVTNLRRVTY VVLDEADRMF
DMGFEPQVMK IMANIRPDRQ TVLFSATFPR NMEALARKSL TKPIEIVVGG KSVVAPEITQ
IVEVRNEDTK FVRLLEILGN LYSDDANEDA RALIFVDRQE AADTLLRELM RKGYPCMSIH
GGKDQIDRDS TIEDFKAGIF PILIATSVAA RGLDVKQLKL VVNYDAPNHL EDYVHRAGRT
GRAGNTGTAV TFLTEEQERY SVDIAKALRQ SGQKVPEPVQ KMVDSFLEKV KAGKEKASAS
GFGGKGLERL DQERDAARMR ERRTYKTGEE GEDEEDKEDK AEKADERFSK VVSSVQSAAA
AATTPLPGVP KGIDLDGKIT VHRTEKDPAG ASKNPLDKVG SAVADIHARL SRAGVMRSGV
PIDNRGPDAG AFHATLEIND FPQKARWAVT NRTNVAKILE ATGTSITTKG SFYPAGKEPG
PGENPKLYIL VEGETELAVT NAMRELMRLL KEGTLAAADS DARAPVGGRY NVV