PRR73_ORYSJ
ID PRR73_ORYSJ Reviewed; 767 AA.
AC Q10N34; Q689G4; Q689G7; Q8H8T5;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Two-component response regulator-like PRR73;
DE AltName: Full=Pseudo-response regulator 73;
DE Short=OsPRR73;
GN Name=PRR73; OrderedLocusNames=Os03g0284100, LOC_Os03g17570;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND INDUCTION.
RC STRAIN=cv. Nipponbare;
RX PubMed=14634161; DOI=10.1093/pcp/pcg135;
RA Murakami M., Ashikari M., Miura K., Yamashino T., Mizuno T.;
RT "The evolutionarily conserved OsPRR quintet: rice pseudo-response
RT regulators implicated in circadian rhythm.";
RL Plant Cell Physiol. 44:1229-1236(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP INDUCTION.
RX PubMed=15725670; DOI=10.1271/bbb.69.410;
RA Murakami M., Matsushika A., Ashikari M., Yamashino T., Mizuno T.;
RT "Circadian-associated rice pseudo response regulators (OsPRRs): insight
RT into the control of flowering time.";
RL Biosci. Biotechnol. Biochem. 69:410-414(2005).
CC -!- FUNCTION: Controls photoperiodic flowering response. Seems to be one of
CC the component of the circadian clock. Expression of several members of
CC the ARR-like family is controlled by circadian rhythm. The particular
CC coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and
CC PPR1 result to circadian waves that may be at the basis of the
CC endogenous circadian clock (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- INDUCTION: Expressed with a circadian rhythm showing a broad peak in
CC the middle day. {ECO:0000269|PubMed:14634161,
CC ECO:0000269|PubMed:15725670}.
CC -!- SIMILARITY: Belongs to the ARR-like family. {ECO:0000305}.
CC -!- CAUTION: Lacks the phospho-accepting Asp (here Glu-133), present in the
CC receiver domain, which is one of the conserved features of two-
CC component response regulators (ARRs) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAN64489.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB189040; BAD38856.1; -; mRNA.
DR EMBL; AC084405; AAN64489.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DP000009; ABF95338.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF11674.1; -; Genomic_DNA.
DR EMBL; AP014959; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_015630696.1; XM_015775210.1.
DR RefSeq; XP_015630697.1; XM_015775211.1.
DR RefSeq; XP_015630698.1; XM_015775212.1.
DR RefSeq; XP_015630699.1; XM_015775213.1.
DR RefSeq; XP_015630700.1; XM_015775214.1.
DR AlphaFoldDB; Q10N34; -.
DR SMR; Q10N34; -.
DR STRING; 4530.OS03T0284100-01; -.
DR PaxDb; Q10N34; -.
DR PRIDE; Q10N34; -.
DR EnsemblPlants; Os03t0284100-04; Os03t0284100-04; Os03g0284100.
DR GeneID; 4332464; -.
DR Gramene; Os03t0284100-04; Os03t0284100-04; Os03g0284100.
DR KEGG; osa:4332464; -.
DR eggNOG; KOG1601; Eukaryota.
DR InParanoid; Q10N34; -.
DR OrthoDB; 320146at2759; -.
DR PlantReactome; R-OSA-8933811; Circadian rhythm.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR ExpressionAtlas; Q10N34; baseline and differential.
DR Genevisible; Q10N34; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009736; P:cytokinin-activated signaling pathway; IEA:InterPro.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
DR GO; GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
DR InterPro; IPR045279; ARR-like.
DR InterPro; IPR010402; CCT_domain.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR PANTHER; PTHR43874; PTHR43874; 1.
DR Pfam; PF06203; CCT; 1.
DR Pfam; PF00072; Response_reg; 1.
DR SMART; SM00448; REC; 1.
DR SUPFAM; SSF52172; SSF52172; 1.
DR PROSITE; PS51017; CCT; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE 2: Evidence at transcript level;
KW Biological rhythms; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Two-component regulatory system.
FT CHAIN 1..767
FT /note="Two-component response regulator-like PRR73"
FT /id="PRO_0000081444"
FT DOMAIN 82..200
FT /note="Response regulatory"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
FT DOMAIN 712..754
FT /note="CCT"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00357"
FT REGION 1..64
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 205..272
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..388
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 476..546
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 646..701
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 727..767
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 28..43
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 233..251
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 344..388
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 648..676
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 767 AA; 84079 MW; 28E681340FC7972E CRC64;
MGSACEAGTD EPSRDDVKGT GNGILENGHS HKPEEEEWRN GMGEDLPNGH STPPEPQQTD
EQKEHQVQIV RWERFLPVKT LRVLLVENDD STRQVVSALL RKCCYEVIPA ENGLHAWQCL
EDLQNHIDLV LTEVVMPRLS GIGLLSKITS HKICKDIPVI MMSSNDSMGT VFKCLSKGAV
DFLVKPIRKN ELKNLWQHVW RRCHSSSGSG SESGIRTQKC TKPKVDDEYE NNSGSNNDNE
DDDDNDEDDD DLSVGHNARD GSDNGSGTQS SWTKRAVEID SPQQMSPDQP SDLPDSTCAQ
VIHPTSEICS NRWLPTANKR SGKKHKENND DSMGKYLEIG APRNSSMEYQ SSPREMSVNP
TEKQHETLMP QSKTTRETDS RNTQNEPTTQ TVDLISSIAR STDDKQVVRI NNAPDCSSKV
PDGNDKNRDS LIDMTSEELG LKRLKTTGSA TEIHDERNIL KRSDLSAFTR YHTTVASNQG
GAGFGGSCSP QDNSSEALKT DSNCKVKSNS DAAEIKQGSN GSSNNNDMGS STKNAITKPS
SNRGKVISPS AVKATQHTSA FHPVQRQTSP ANVVGKDKVD EGIANGVNVG HPVDVQNSFM
QHHHHVHYYV HVMTQQQQQP SIERGSSDAQ CGSSNVFDPP IEGHAANYSV NGSFSGGHNG
NNGQRGPSTA PNVGRPNMET VNGIVDENGA GGGNGSGSGS GNDLYQNGVC YREAALNKFR
QKRKVRNFGK KVRYQSRKRL AEQRPRIRGQ FVRQSGQEDQ AGQDEDR
