PSAH2_ARATH
ID PSAH2_ARATH Reviewed; 145 AA.
AC Q9SUI6;
DT 16-NOV-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Photosystem I reaction center subunit VI-2, chloroplastic;
DE AltName: Full=PSI-H1;
DE Flags: Precursor;
GN Name=PSAH2; OrderedLocusNames=At1g52230; ORFNames=F9I5.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Legen J., Misera S., Herrmann R.G., Altschmied L.;
RT "Sequences and map position of 31 Arabidopsis thaliana cDNAs encoding
RT organellar polypeptides.";
RL Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Possible role could be the docking of the LHC I antenna
CC complex to the core complex.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the psaH family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AJ245632; CAB52750.1; -; mRNA.
DR EMBL; AC022354; AAF29410.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE32772.1; -; Genomic_DNA.
DR EMBL; AF385712; AAK60304.1; -; mRNA.
DR EMBL; AY133667; AAM91497.1; -; mRNA.
DR EMBL; AY085302; AAM62533.1; -; mRNA.
DR PIR; C96562; C96562.
DR RefSeq; NP_175633.1; NM_104102.3.
DR PDB; 7WFD; EM; 3.25 A; AH=1-145.
DR PDB; 7WFE; EM; 3.25 A; BH=1-145.
DR PDB; 7WG5; EM; 3.89 A; AH/BH=1-145.
DR PDBsum; 7WFD; -.
DR PDBsum; 7WFE; -.
DR PDBsum; 7WG5; -.
DR AlphaFoldDB; Q9SUI6; -.
DR SMR; Q9SUI6; -.
DR BioGRID; 26878; 5.
DR STRING; 3702.AT1G52230.1; -.
DR TCDB; 5.B.4.1.1; the plant photosystem i supercomplex (psi) family.
DR PaxDb; Q9SUI6; -.
DR PRIDE; Q9SUI6; -.
DR ProteomicsDB; 226392; -.
DR EnsemblPlants; AT1G52230.1; AT1G52230.1; AT1G52230.
DR GeneID; 841653; -.
DR Gramene; AT1G52230.1; AT1G52230.1; AT1G52230.
DR KEGG; ath:AT1G52230; -.
DR Araport; AT1G52230; -.
DR TAIR; locus:2037440; AT1G52230.
DR eggNOG; ENOG502RXI9; Eukaryota.
DR HOGENOM; CLU_152855_0_0_1; -.
DR InParanoid; Q9SUI6; -.
DR OMA; KWDLYGS; -.
DR OrthoDB; 1496966at2759; -.
DR PhylomeDB; Q9SUI6; -.
DR BioCyc; ARA:AT1G52230-MON; -.
DR PRO; PR:Q9SUI6; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SUI6; baseline and differential.
DR Genevisible; Q9SUI6; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009534; C:chloroplast thylakoid; HDA:TAIR.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; HDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR GO; GO:0009538; C:photosystem I reaction center; IEA:InterPro.
DR GO; GO:0009579; C:thylakoid; HDA:TAIR.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR InterPro; IPR004928; PSI_PsaH.
DR PANTHER; PTHR34787; PTHR34787; 1.
DR Pfam; PF03244; PSI_PsaH; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Chloroplast; Membrane; Photosynthesis; Photosystem I;
KW Plastid; Reference proteome; Thylakoid; Transit peptide; Transmembrane;
KW Transmembrane helix.
FT TRANSIT 1..50
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 51..145
FT /note="Photosystem I reaction center subunit VI-2,
FT chloroplastic"
FT /id="PRO_0000029413"
FT TRANSMEM 102..118
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 126..145
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 145 AA; 15274 MW; E2884F419908CD30 CRC64;
MASFATIAAV QPSAAVKGLG GSSLAGAKLF IKPSRQSFKT KSTRAGAVVA KYGDKSVYFD
LEDLGNTTGQ WDVYGSDAPS PYNPLQSKFF ETFAAPFTKR GLLLKFLILG GGSLLTYVSA
NSTGDVLPIK RGPQEPPKLG PRGKL
