PSAH_ORYSJ
ID PSAH_ORYSJ Reviewed; 142 AA.
AC Q0DG05; B7E4T5; P22181; Q6AT29; Q9SBB9;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 17-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Photosystem I reaction center subunit VI, chloroplastic;
DE Short=PSI-H;
DE AltName: Full=Light-harvesting complex I 11 kDa protein;
DE AltName: Full=Protein GOS5;
DE Flags: Precursor;
GN Name=PSAH; Synonyms=GOS5; OrderedLocusNames=Os05g0560000, LOC_Os05g48630;
GN ORFNames=OJ1115_B06.3, OsJ_018737, OsJ_19524 {ECO:0000312|EMBL:EEE64669.1},
GN OSJNBa0001A14.18;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Ilpoom; TISSUE=Leaf;
RA Lee J.-S., Seok S.-J., Eun M.-Y.;
RT "Molecular cloning and characterization of shoot specific GOS5 (PSI-H) in
RT rice.";
RL Submitted (SEP-1998) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Possible role could be the docking of the LHC I antenna
CC complex to the core complex.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000250}; Single-pass membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the psaH family. {ECO:0000305}.
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DR EMBL; AF093635; AAC78107.1; -; mRNA.
DR EMBL; AC113333; AAU10639.1; -; Genomic_DNA.
DR EMBL; AC144735; AAT85106.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF18218.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS95309.1; -; Genomic_DNA.
DR EMBL; CM000142; EAZ35254.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE64669.1; -; Genomic_DNA.
DR EMBL; AK060254; BAG87382.1; -; mRNA.
DR EMBL; AK061603; BAG88034.1; -; mRNA.
DR RefSeq; XP_015640606.1; XM_015785120.1.
DR AlphaFoldDB; Q0DG05; -.
DR SMR; Q0DG05; -.
DR STRING; 4530.OS05T0560000-01; -.
DR PRIDE; Q0DG05; -.
DR EnsemblPlants; Os05t0560000-01; Os05t0560000-01; Os05g0560000.
DR GeneID; 4339593; -.
DR Gramene; Os05t0560000-01; Os05t0560000-01; Os05g0560000.
DR KEGG; osa:4339593; -.
DR eggNOG; ENOG502RXI9; Eukaryota.
DR HOGENOM; CLU_152855_0_0_1; -.
DR InParanoid; Q0DG05; -.
DR OMA; KWDLYGS; -.
DR OrthoDB; 1496966at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q0DG05; OS.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009538; C:photosystem I reaction center; IEA:InterPro.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR InterPro; IPR004928; PSI_PsaH.
DR PANTHER; PTHR34787; PTHR34787; 1.
DR Pfam; PF03244; PSI_PsaH; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Membrane; Photosynthesis; Photosystem I; Plastid;
KW Reference proteome; Thylakoid; Transit peptide; Transmembrane;
KW Transmembrane helix.
FT TRANSIT 1..47
FT /note="Chloroplast"
FT CHAIN 48..142
FT /note="Photosystem I reaction center subunit VI,
FT chloroplastic"
FT /id="PRO_0000029418"
FT TRANSMEM 101..119
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 142 AA; 15044 MW; 72D83738EC9CAF2B CRC64;
MASLVAVQPV AVKGLAGSSI SGRKLAVRPS PRALCRTTRR PRAAVVAKYG EKSVYFDLED
IGNTTGQWDL YGSDAPSPYN PLQSKFFETF AGPFTKRGLL LKFLLLGGGS LVAYVSASAS
PDLLPIKKGP QLPPTPGPRG KI
