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ATGT_METMP
ID   ATGT_METMP              Reviewed;         649 AA.
AC   Q6LZL5;
DT   25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 99.
DE   RecName: Full=tRNA-guanine(15) transglycosylase {ECO:0000255|HAMAP-Rule:MF_01634};
DE            EC=2.4.2.48 {ECO:0000255|HAMAP-Rule:MF_01634};
DE   AltName: Full=7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01634};
DE   AltName: Full=Archaeal tRNA-guanine transglycosylase {ECO:0000255|HAMAP-Rule:MF_01634};
GN   Name=tgtA {ECO:0000255|HAMAP-Rule:MF_01634}; OrderedLocusNames=MMP0610;
OS   Methanococcus maripaludis (strain S2 / LL).
OC   Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC   Methanococcaceae; Methanococcus.
OX   NCBI_TaxID=267377;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S2 / LL;
RX   PubMed=15466049; DOI=10.1128/jb.186.20.6956-6969.2004;
RA   Hendrickson E.L., Kaul R., Zhou Y., Bovee D., Chapman P., Chung J.,
RA   Conway de Macario E., Dodsworth J.A., Gillett W., Graham D.E., Hackett M.,
RA   Haydock A.K., Kang A., Land M.L., Levy R., Lie T.J., Major T.A.,
RA   Moore B.C., Porat I., Palmeiri A., Rouse G., Saenphimmachak C., Soell D.,
RA   Van Dien S., Wang T., Whitman W.B., Xia Q., Zhang Y., Larimer F.W.,
RA   Olson M.V., Leigh J.A.;
RT   "Complete genome sequence of the genetically tractable hydrogenotrophic
RT   methanogen Methanococcus maripaludis.";
RL   J. Bacteriol. 186:6956-6969(2004).
CC   -!- FUNCTION: Exchanges the guanine residue with 7-cyano-7-deazaguanine
CC       (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal
CC       tRNAs. {ECO:0000255|HAMAP-Rule:MF_01634}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=7-cyano-7-deazaguanine + guanosine(15) in tRNA = 7-cyano-7-
CC         carbaguanosine(15) in tRNA + guanine; Xref=Rhea:RHEA:43164,
CC         Rhea:RHEA-COMP:10371, Rhea:RHEA-COMP:10372, ChEBI:CHEBI:16235,
CC         ChEBI:CHEBI:45075, ChEBI:CHEBI:74269, ChEBI:CHEBI:82850; EC=2.4.2.48;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01634};
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01634};
CC       Note=Binds 1 zinc ion per subunit. {ECO:0000255|HAMAP-Rule:MF_01634};
CC   -!- PATHWAY: tRNA modification; archaeosine-tRNA biosynthesis.
CC       {ECO:0000255|HAMAP-Rule:MF_01634}.
CC   -!- SIMILARITY: Belongs to the archaeosine tRNA-ribosyltransferase family.
CC       {ECO:0000255|HAMAP-Rule:MF_01634}.
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DR   EMBL; BX950229; CAF30166.1; -; Genomic_DNA.
DR   RefSeq; WP_011170554.1; NC_005791.1.
DR   AlphaFoldDB; Q6LZL5; -.
DR   SMR; Q6LZL5; -.
DR   STRING; 267377.MMP0610; -.
DR   PRIDE; Q6LZL5; -.
DR   EnsemblBacteria; CAF30166; CAF30166; MMP0610.
DR   GeneID; 2762310; -.
DR   KEGG; mmp:MMP0610; -.
DR   PATRIC; fig|267377.15.peg.624; -.
DR   eggNOG; arCOG00989; Archaea.
DR   eggNOG; arCOG00991; Archaea.
DR   HOGENOM; CLU_030083_0_0_2; -.
DR   OMA; FPCSCPV; -.
DR   OrthoDB; 10236at2157; -.
DR   BioCyc; MMAR267377:MMP_RS03210-MON; -.
DR   UniPathway; UPA00393; -.
DR   Proteomes; UP000000590; Chromosome.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016763; F:pentosyltransferase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0006400; P:tRNA modification; IEA:InterPro.
DR   Gene3D; 2.30.130.10; -; 1.
DR   Gene3D; 3.10.450.90; -; 1.
DR   Gene3D; 3.20.20.105; -; 1.
DR   Gene3D; 3.90.1020.10; -; 1.
DR   HAMAP; MF_01634; TgtA_arch; 1.
DR   InterPro; IPR038370; ArcTGT_C1_sf.
DR   InterPro; IPR002478; PUA.
DR   InterPro; IPR015947; PUA-like_sf.
DR   InterPro; IPR036974; PUA_sf.
DR   InterPro; IPR036511; TGT-like_sf.
DR   InterPro; IPR029402; TGT_C2.
DR   InterPro; IPR038250; TGT_C2_sf.
DR   InterPro; IPR004804; TgtA.
DR   InterPro; IPR002616; tRNA_ribo_trans-like.
DR   Pfam; PF01472; PUA; 1.
DR   Pfam; PF01702; TGT; 1.
DR   Pfam; PF14810; TGT_C2; 1.
DR   SMART; SM00359; PUA; 1.
DR   SUPFAM; SSF51713; SSF51713; 1.
DR   SUPFAM; SSF88697; SSF88697; 1.
DR   TIGRFAMs; TIGR00432; arcsn_tRNA_tgt; 1.
DR   TIGRFAMs; TIGR00449; tgt_general; 1.
DR   PROSITE; PS50890; PUA; 1.
PE   3: Inferred from homology;
KW   Glycosyltransferase; Metal-binding; Reference proteome; Transferase;
KW   tRNA processing; Zinc.
FT   CHAIN           1..649
FT                   /note="tRNA-guanine(15) transglycosylase"
FT                   /id="PRO_0000247871"
FT   DOMAIN          573..648
FT                   /note="PUA"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01634"
FT   ACT_SITE        88
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01634"
FT   BINDING         123
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01634"
FT   BINDING         194
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01634"
FT   BINDING         280
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01634"
FT   BINDING         282
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01634"
FT   BINDING         285
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01634"
SQ   SEQUENCE   649 AA;  74401 MW;  FA2227F96B4925DC CRC64;
     MFEIKARDAM GRLGSITING KKIETPTIMP VIHPNPKKQT VSMDLINKMA DVVITNSYIT
     YTTPELREIA ETKGIHELID FKNVVVTDSG SFQLSVYGDV NVGPMEIIDF QEKIGVDVGT
     ILDIPTGPDV SREKAESDLI ETFKRAEDSI KRRKEMGYKL ALNGTIQGSK YLDLRQKSAE
     VMGKMDFDIY PIGAVVPLME DYRYREVAEV ILNSKMHLPT NKPVHLFGCG HPMLFALSVA
     LGCDLFDSAA YALYAKNGRY LTADGTLHLK DMKDLKSFPC TCKVCSEYTP KQLYNLEEKE
     KTRLLAEHNL YVTFEEIDRI KNAIKEGNLW ELVEERCRSH PKLLNGLRVI SKYMDFIEKH
     DPVSKKSGFF YTGYESMNRP EIYRHKQRLD RIQYDKIYVT SVSENTSKPY SENLSNVPCD
     VDVLVKDSVF GLVPLNIDTM YPLAQNEVPD LYDFEKKYNN EFVSEFNEKH AEKILDISTY
     NYYINHYGKK KECDKINPDI FRIGKMLEYQ YGAKILDEEL MEKVKSRRSK NTGRIRNLLL
     EKEVLFTLRA NDNFLIPAKS GAELLHEKLE FPKYRIVIDS SVEEFARAGK SVYSKFVKDC
     DPELRPFEEV LIVNSDDELL AYGTTILNGR ELMEFDYGVA ATLRGGLKK
 
 
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