ATL71_ARATH
ID ATL71_ARATH Reviewed; 197 AA.
AC Q9FG21;
DT 05-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Putative RING-H2 finger protein ATL71;
DE EC=2.3.2.27 {ECO:0000305};
DE AltName: Full=RING-type E3 ubiquitin transferase ATL71 {ECO:0000305};
GN Name=ATL71; OrderedLocusNames=At5g06490; ORFNames=F15M7.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY ORGANIZATION.
RX PubMed=11983057; DOI=10.1186/gb-2002-3-4-research0016;
RA Kosarev P., Mayer K.F.X., Hardtke C.S.;
RT "Evaluation and classification of RING-finger domains encoded by the
RT Arabidopsis genome.";
RL Genome Biol. 3:RESEARCH0016.1-RESEARCH0016.12(2002).
RN [4]
RP NOMENCLATURE, AND GENE FAMILY ORGANIZATION.
RX PubMed=16557337; DOI=10.1007/s00239-005-0038-y;
RA Serrano M., Parra S., Alcaraz L.D., Guzman P.;
RT "The ATL gene family from Arabidopsis thaliana and Oryza sativa comprises a
RT large number of putative ubiquitin ligases of the RING-H2 type.";
RL J. Mol. Evol. 62:434-445(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000305};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- DOMAIN: The RING-type zinc finger domain mediates binding to an E2
CC ubiquitin-conjugating enzyme. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RING-type zinc finger family. ATL subfamily.
CC {ECO:0000305}.
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DR EMBL; AP002543; BAB11398.1; -; Genomic_DNA.
DR EMBL; CP002688; AED91023.1; -; Genomic_DNA.
DR RefSeq; NP_196267.1; NM_120732.2.
DR AlphaFoldDB; Q9FG21; -.
DR SMR; Q9FG21; -.
DR PaxDb; Q9FG21; -.
DR PRIDE; Q9FG21; -.
DR EnsemblPlants; AT5G06490.1; AT5G06490.1; AT5G06490.
DR GeneID; 830537; -.
DR Gramene; AT5G06490.1; AT5G06490.1; AT5G06490.
DR KEGG; ath:AT5G06490; -.
DR Araport; AT5G06490; -.
DR TAIR; locus:2144088; AT5G06490.
DR eggNOG; KOG0800; Eukaryota.
DR HOGENOM; CLU_013137_15_4_1; -.
DR InParanoid; Q9FG21; -.
DR OMA; SRRPMDI; -.
DR OrthoDB; 1481143at2759; -.
DR PhylomeDB; Q9FG21; -.
DR UniPathway; UPA00143; -.
DR PRO; PR:Q9FG21; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FG21; baseline and differential.
DR Genevisible; Q9FG21; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR045899; ATL71-like.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46719; PTHR46719; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Membrane; Metal-binding; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix; Ubl conjugation pathway; Zinc; Zinc-finger.
FT CHAIN 1..197
FT /note="Putative RING-H2 finger protein ATL71"
FT /id="PRO_0000055808"
FT TRANSMEM 20..40
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ZN_FING 129..171
FT /note="RING-type; atypical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
FT REGION 53..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 197 AA; 22031 MW; 47FC77C7F59CE58F CRC64;
MNATVVPPYS GHWLTNTDRM GGLAYGIGVS IGILMLITTI TLTSYYCTRS HISASPTTTP
RTRRRQRESN GTLPPGQERF DFEDDESDTV VVEVLGLTEE VIKGFPKLPY EEARVSYSLQ
KESSTTSCCS ICLADYKKMD MIRVLPDCNH LFHDNCVDPW LRLHPTCPVC RTSPLPSPAM
TPVADVVPFS RRPMMDI