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ATL_STAA1
ID   ATL_STAA1               Reviewed;        1255 AA.
AC   A7X0T9; O32391; P0C1R4; P52081; Q7WTC6; Q7WY94; Q7WY95;
DT   15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT   15-JAN-2008, sequence version 2.
DT   03-AUG-2022, entry version 77.
DE   RecName: Full=Bifunctional autolysin;
DE   Includes:
DE     RecName: Full=N-acetylmuramoyl-L-alanine amidase;
DE              EC=3.5.1.28;
DE   Includes:
DE     RecName: Full=Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase;
DE              EC=3.2.1.96;
DE   Flags: Precursor;
GN   Name=atl; Synonyms=nag; OrderedLocusNames=SAHV_1045;
OS   Staphylococcus aureus (strain Mu3 / ATCC 700698).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;
OC   Staphylococcus.
OX   NCBI_TaxID=418127;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Mu3 / ATCC 700698;
RX   PubMed=17954695; DOI=10.1128/aac.00534-07;
RA   Neoh H.-M., Cui L., Yuzawa H., Takeuchi F., Matsuo M., Hiramatsu K.;
RT   "Mutated response regulator graR is responsible for phenotypic conversion
RT   of Staphylococcus aureus from heterogeneous vancomycin-intermediate
RT   resistance to vancomycin-intermediate resistance.";
RL   Antimicrob. Agents Chemother. 52:45-53(2008).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 784-1255.
RA   Wootton M., Avison M.B., Bennett P.M., Howe R.A., MacGowan A.P.,
RA   Walsh T.R.;
RT   "Genetic analysis of seventeen genes in Staphylococcus aureus with reduced
RT   susceptibility to vancomycin (VRSA) and heteroVRSA (hVRSA).";
RL   Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Endohydrolysis of the di-N-acetylchitobiosyl unit in high-
CC       mannose glycopeptides and glycoproteins containing the
CC       -[(Man)5(GlcNAc)2]-Asn structure. One N-acetyl-D-glucosamine residue
CC       remains attached to the protein; the rest of the oligosaccharide is
CC       released intact. Cleaves the peptidoglycan connecting the daughter
CC       cells at the end of the cell division cycle, resulting in the
CC       separation of the two newly divided cells. Acts as an autolysin in
CC       penicillin-induced lysis (By similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Hydrolyzes the link between N-acetylmuramoyl residues and L-
CC         amino acid residues in certain cell-wall glycopeptides.; EC=3.5.1.28;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-
CC         mannose glycopeptides and glycoproteins containing the
CC         -[Man(GlcNAc)2]Asn- structure. One N-acetyl-D-glucosamine residue
CC         remains attached to the protein, the rest of the oligosaccharide is
CC         released intact.; EC=3.2.1.96;
CC   -!- SUBUNIT: Oligomer; forms a ring structure at the cell surface which is
CC       important for efficient partitioning of daughter cells after cell
CC       division. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Secreted. Note=Secreted, and then anchored on the
CC       cell surface at the peripheral cell wall above the completed septum
CC       (septal region), for the next cell division cycle. {ECO:0000250}.
CC   -!- DOMAIN: The GW domains are responsible for directing the proteins to
CC       the septal region.
CC   -!- PTM: Undergoes proteolytic processing to generate the two extracellular
CC       lytic enzymes, probably at the septal region on the cell surface.
CC       {ECO:0000250}.
CC   -!- SIMILARITY: In the N-terminal section; belongs to the N-acetylmuramoyl-
CC       L-alanine amidase 2 family. {ECO:0000305}.
CC   -!- SIMILARITY: In the C-terminal section; belongs to the glycosyl
CC       hydrolase 73 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAF77928.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AP009324; BAF77928.1; ALT_INIT; Genomic_DNA.
DR   EMBL; AJ567417; CAD98827.1; -; Genomic_DNA.
DR   AlphaFoldDB; A7X0T9; -.
DR   SMR; A7X0T9; -.
DR   CAZy; GH73; Glycoside Hydrolase Family 73.
DR   KEGG; saw:SAHV_1045; -.
DR   HOGENOM; CLU_005906_0_0_9; -.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR   GO; GO:0004040; F:amidase activity; IEA:InterPro.
DR   GO; GO:0033925; F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
DR   CDD; cd06583; PGRP; 1.
DR   Gene3D; 2.30.30.170; -; 7.
DR   Gene3D; 3.40.80.10; -; 1.
DR   InterPro; IPR036505; Amidase/PGRP_sf.
DR   InterPro; IPR002502; Amidase_domain.
DR   InterPro; IPR025987; GW_dom.
DR   InterPro; IPR038200; GW_dom_sf.
DR   InterPro; IPR002901; MGlyc_endo_b_GlcNAc-like_dom.
DR   Pfam; PF01510; Amidase_2; 1.
DR   Pfam; PF01832; Glucosaminidase; 1.
DR   Pfam; PF13457; GW; 6.
DR   SMART; SM00644; Ami_2; 1.
DR   SMART; SM00047; LYZ2; 1.
DR   SUPFAM; SSF55846; SSF55846; 1.
DR   PROSITE; PS51780; GW; 7.
PE   3: Inferred from homology;
KW   Cell wall biogenesis/degradation; Hydrolase; Multifunctional enzyme;
KW   Repeat; Secreted; Signal.
FT   SIGNAL          1..36
FT                   /evidence="ECO:0000255"
FT   CHAIN           37..1255
FT                   /note="Bifunctional autolysin"
FT                   /id="PRO_0000313013"
FT   DOMAIN          442..516
FT                   /note="GW 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          518..592
FT                   /note="GW 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          611..685
FT                   /note="GW 3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          687..761
FT                   /note="GW 4"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          783..858
FT                   /note="GW 5"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          860..935
FT                   /note="GW 6"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          942..1016
FT                   /note="GW 7"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   REGION          110..141
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          193..218
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          199..775
FT                   /note="N-acetylmuramoyl-L-alanine amidase"
FT   REGION          776..1255
FT                   /note="Endo-beta-N-acetylglucosaminidase"
SQ   SEQUENCE   1255 AA;  137535 MW;  7257DD87168AAE7D CRC64;
     MLGVINRMAK KFNYKLPSMV ALTLVGSAVT AHQVQAAETT QDQTTNKNVL DSNKVKATTE
     QAKAEVKNPT QNISGTQVYQ DPAIVQPKTA NNKTGNAQVS QKVDTAQVNG DTRANQSATT
     NNTQPVAKST STTAPKTNTN VTNAGYSLVD DEDDNSEHQI NPELIKSAAK PAALETQYKA
     AAPKAKTEAT PKVTTFSASA QPRSVAATPK TSLPKYKPQV NSSINDYIRK NNLKAPKIEE
     DYTSYFPKYA YRNGVGRPEG IVVHDTANDR STINGEISYM KNNYQNAFVH AFVDGDRIIE
     TAPTDYLSWG VGAVGNPRFI NVEIVHTHDY ASFARSMNNY ADYAATQLQY YGLKPDSAEY
     DGNGTVWTHY AVSKYLGGTD HADPHGYLRS HNYSYDQLYD LINEKYLIKM GKVAPWGTQF
     TTTPTTPSKP TTPSKPSTGK LTVAANNGVA QIKPTNSGLY TTVYDKTGKA TNEVQKTFAV
     SKTATLGNQK FYLVQDYNSG NKFGWVKEGD VVYNTAKSPV NVNQSYSIKS GTKLYTVPWG
     TSKQVAGSVS GSGNQTFKAS KQQQIDKSIY LYGSVNGKSG WVSKAYLVDT AKPTPTPIPK
     PSTPTTNNKL TVSSLNGVAQ INAKNNGLFT TVYDKTGKPT KEVQKTFAVT KEASLGGNKF
     YLVKDYNSPT LIGWVKQGDV IYNNAKSPVN VMQTYTVKPG TKLYSVPWGT YKQEAGAVSG
     TGNQTFKATK QQQIDKSIYL FGTVNGKSGW VSKAYLAVPA APKKAVAQPK TAVKAYTVTK
     PQTTQTVSKI AQVKPNNTGI RASVYEKTAK NGAKYADRTF YVTKERAHGN ETYVLLNNTS
     HNIPLGWFNV KDLNVQNLGK EVKTTQKYTV NKSNNGLSMV PWGTKNQVIL TGNNIAQGTF
     NATKQVSVGK DVYLYGTINN RTGWVNAKDL TAPTAVKPTT SAAKDYNYTY VIKNGNGYYY
     VTPNSDTAKY SLKAFNEQPF AVVKEQVING QTWYYGKLSN GKLAWIKSTD LAKELIKYNQ
     TGMTLNQVAQ IQAGLQYKPQ VQRVPGKWTD ANFNDVKHAM DTKRLAQDPA LKYQFLRLDQ
     PQNISIDKIN QFLKGKGVLE NQGAAFNKAA QMYGINEVYL ISHALLETGN GTSQLAKGAD
     VVNNKVVTNS NTKYHNVFGI AAYDNDPLRE GIKYAKQAGW DTVSKAIVGG AKFIGNSYVK
     AGQNTLYKMR WNPAHPGTHQ YATDVDWANI NAKIIKGYYD KIGEVGKYFD IPQYK
 
 
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