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ATL_STAAS
ID   ATL_STAAS               Reviewed;        1250 AA.
AC   Q6GAG0;
DT   10-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT   19-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 99.
DE   RecName: Full=Bifunctional autolysin;
DE   Includes:
DE     RecName: Full=N-acetylmuramoyl-L-alanine amidase;
DE              EC=3.5.1.28;
DE   Includes:
DE     RecName: Full=Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase;
DE              EC=3.2.1.96;
DE   Flags: Precursor;
GN   Name=atl; Synonyms=nag; OrderedLocusNames=SAS0988;
OS   Staphylococcus aureus (strain MSSA476).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;
OC   Staphylococcus.
OX   NCBI_TaxID=282459;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MSSA476;
RX   PubMed=15213324; DOI=10.1073/pnas.0402521101;
RA   Holden M.T.G., Feil E.J., Lindsay J.A., Peacock S.J., Day N.P.J.,
RA   Enright M.C., Foster T.J., Moore C.E., Hurst L., Atkin R., Barron A.,
RA   Bason N., Bentley S.D., Chillingworth C., Chillingworth T., Churcher C.,
RA   Clark L., Corton C., Cronin A., Doggett J., Dowd L., Feltwell T., Hance Z.,
RA   Harris B., Hauser H., Holroyd S., Jagels K., James K.D., Lennard N.,
RA   Line A., Mayes R., Moule S., Mungall K., Ormond D., Quail M.A.,
RA   Rabbinowitsch E., Rutherford K.M., Sanders M., Sharp S., Simmonds M.,
RA   Stevens K., Whitehead S., Barrell B.G., Spratt B.G., Parkhill J.;
RT   "Complete genomes of two clinical Staphylococcus aureus strains: evidence
RT   for the rapid evolution of virulence and drug resistance.";
RL   Proc. Natl. Acad. Sci. U.S.A. 101:9786-9791(2004).
CC   -!- FUNCTION: Endohydrolysis of the di-N-acetylchitobiosyl unit in high-
CC       mannose glycopeptides and glycoproteins containing the
CC       -[(Man)5(GlcNAc)2]-Asn structure. One N-acetyl-D-glucosamine residue
CC       remains attached to the protein; the rest of the oligosaccharide is
CC       released intact. Cleaves the peptidoglycan connecting the daughter
CC       cells at the end of the cell division cycle, resulting in the
CC       separation of the two newly divided cells. Acts as an autolysin in
CC       penicillin-induced lysis (By similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Hydrolyzes the link between N-acetylmuramoyl residues and L-
CC         amino acid residues in certain cell-wall glycopeptides.; EC=3.5.1.28;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-
CC         mannose glycopeptides and glycoproteins containing the
CC         -[Man(GlcNAc)2]Asn- structure. One N-acetyl-D-glucosamine residue
CC         remains attached to the protein, the rest of the oligosaccharide is
CC         released intact.; EC=3.2.1.96;
CC   -!- SUBUNIT: Oligomer; forms a ring structure at the cell surface which is
CC       important for efficient partitioning of daughter cells after cell
CC       division. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}. Note=Secreted, and then
CC       anchored on the cell surface at the peripheral cell wall above the
CC       completed septum (septal region), for the next cell division cycle.
CC       {ECO:0000250}.
CC   -!- DOMAIN: The GW domains are responsible for directing the proteins to
CC       the septal region. {ECO:0000250}.
CC   -!- PTM: Undergoes proteolytic processing to generate the two extracellular
CC       lytic enzymes, probably at the septal region on the cell surface.
CC       {ECO:0000250}.
CC   -!- SIMILARITY: In the N-terminal section; belongs to the N-acetylmuramoyl-
CC       L-alanine amidase 2 family. {ECO:0000305}.
CC   -!- SIMILARITY: In the C-terminal section; belongs to the glycosyl
CC       hydrolase 73 family. {ECO:0000305}.
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DR   EMBL; BX571857; CAG42763.1; -; Genomic_DNA.
DR   RefSeq; WP_001074541.1; NC_002953.3.
DR   AlphaFoldDB; Q6GAG0; -.
DR   SMR; Q6GAG0; -.
DR   CAZy; GH73; Glycoside Hydrolase Family 73.
DR   KEGG; sas:SAS0988; -.
DR   HOGENOM; CLU_005906_0_0_9; -.
DR   OMA; FPKYGYR; -.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR   GO; GO:0004040; F:amidase activity; IEA:InterPro.
DR   GO; GO:0033925; F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
DR   CDD; cd06583; PGRP; 1.
DR   Gene3D; 2.30.30.170; -; 7.
DR   Gene3D; 3.40.80.10; -; 1.
DR   InterPro; IPR036505; Amidase/PGRP_sf.
DR   InterPro; IPR002502; Amidase_domain.
DR   InterPro; IPR025987; GW_dom.
DR   InterPro; IPR038200; GW_dom_sf.
DR   InterPro; IPR002901; MGlyc_endo_b_GlcNAc-like_dom.
DR   Pfam; PF01510; Amidase_2; 1.
DR   Pfam; PF01832; Glucosaminidase; 1.
DR   Pfam; PF13457; GW; 6.
DR   SMART; SM00644; Ami_2; 1.
DR   SMART; SM00047; LYZ2; 1.
DR   SUPFAM; SSF55846; SSF55846; 1.
DR   PROSITE; PS51780; GW; 7.
PE   3: Inferred from homology;
KW   Cell wall biogenesis/degradation; Hydrolase; Multifunctional enzyme;
KW   Repeat; Secreted; Signal.
FT   SIGNAL          1..29
FT                   /evidence="ECO:0000255"
FT   CHAIN           30..1250
FT                   /note="Bifunctional autolysin"
FT                   /id="PRO_0000045477"
FT   DOMAIN          437..511
FT                   /note="GW 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          513..587
FT                   /note="GW 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          606..680
FT                   /note="GW 3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          682..756
FT                   /note="GW 4"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          778..853
FT                   /note="GW 5"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          855..930
FT                   /note="GW 6"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   DOMAIN          937..1011
FT                   /note="GW 7"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01116"
FT   REGION          103..151
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          173..219
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          199..769
FT                   /note="N-acetylmuramoyl-L-alanine amidase"
FT   REGION          770..1250
FT                   /note="Endo-beta-N-acetylglucosaminidase"
FT   COMPBIAS        103..139
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        184..219
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1250 AA;  136868 MW;  D8C43606B9374D96 CRC64;
     MAKKFNYKLP SMVALTLVGS AVTAHQVQAA ETTQDQTTNK NVLDSNKVKA TTEQAKAEVK
     NPTQNISGTQ VYQDPAIVQP KTANNKTGNA QVSQKVDTAQ VNGDTRANQS ATTNNTQPVA
     KSTSTTAPKT NTNVTNAGYS LVDDEDDNSE NQINPELIKS AAKPAALETQ YKAAAPKAAT
     TSAPKAKTEA TPKVTTFSAS AQPRSVAATP KTSLPKYKPQ VNSSINDYIR KNNLKAPKIE
     EDYTSYFPKY AYRNGVGRPE GIVVHDTAND RSTINGEISY MKNNYQNAFV HAFVDGDRII
     ETAPTDYLSW GVGAVGNPRF INVEIVHTHD YASFARSMNN YADYAATQLQ YYGLKPDSAE
     YDGNGTVWTH YAVSKYLGGT DHADPHGYLR SHNYSYDQLY DLINEKYLIK MGKVAPWGTQ
     STTTPTTPSK PSTGKLTVAA NNGVAQIKPT NSGLYTTVYD KTGKATNEVQ KTFAVSKTAT
     LGNQKFYLVQ DYNSGNKFGW VKEGDVVYNT AKSPVNVNQS YSIKPGTKLY TVPWGTSKQV
     AGSVSGSGNQ TFKASKQQQI DKSIYLYGSV NGKSGWVSKA YLVDTAKPTP TPTPKPSTPT
     TNNKLTVSSL NGVAQINAKN NGLFTTVYDK TGKPTKEVQK TFAVTKEASL GGNKFYLVKD
     YNSPTLIGWV KQGDVIYNNA KSPVNVMQTY TVKPGTKLYS VPWGTYKQEA GAVSGTGNQT
     FKATKQQQID KSIYLFGTVN GKSGWVSKAY LAVPAAPKKA VAQPKTAVKA YTVTKPQTTQ
     TVSKIAQVKP NNTGIRASVY EKTAKNGAKY ADRTFYVTKE RAHGNETYVL LNNTSHNIPL
     GWFNVKDLNV QNLGKEVKTT QKYTVNKSNN GLSMVPWGTK NQVILTGNNI AQGTFNATKQ
     VSVGKDVYLY GTINNRTGWV NAKDLTAPTA VKPTTSAAKD YNYTYVIKNG NGYYYVTPNS
     DTAKYSLKAF NEQPFAVVKE QVINEQTWYY GKLSNGKLAW IKSTDLAKEL IKYNQTGMTL
     NQVAQIQAGL QYKPQVQRVP GKWTDANFND VKHAMDTKRL AQDPALKYQF LRLDQPQNIS
     IDKINQFLKG KGVLENQGAA FNKAAQMYGI NEVYLISHAL LETGNGTSQL AKGADVVNNK
     VVTNSNTKYH NVFGIAAYDN DPLREGIKYA KQAGWDTVSK AIVGGAKFIG NSYVKAGQNT
     LYKMRWNPAH PGTHQYATDI DWANINAKII KGYYDKIGEV GKYFDIPQYK
 
 
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