ID   PTA12_ORYSJ             Reviewed;         551 AA.
AC   Q0JIZ1; Q5ZD13;
DT   25-OCT-2017, integrated into UniProtKB/Swiss-Prot.
DT   03-OCT-2006, sequence version 1.
DT   03-AUG-2022, entry version 91.
DE   RecName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic {ECO:0000305};
DE   Flags: Precursor;
GN   Name=PTAC12 {ECO:0000305};
GN   OrderedLocusNames=Os01g0769900 {ECO:0000312|EMBL:BAF06287.1},
GN   LOC_Os01g56350 {ECO:0000305};
GN   ORFNames=OsJ_03603 {ECO:0000312|EMBL:EEE55447.1},
GN   P0665A11.10 {ECO:0000312|EMBL:BAD52717.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447438; DOI=10.1038/nature01184;
RA   Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA   Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA   Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA   Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA   Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA   Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA   Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA   Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA   Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA   Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA   Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA   Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA   Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT   "The genome sequence and structure of rice chromosome 1.";
RL   Nature 420:312-316(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
CC   -!- FUNCTION: Required for the activity of the plastid-encoded RNA
CC       polymerase (PEP) and full expression of genes transcribed by PEP.
CC       Required for the proper build-up and formation of the PEP-complex.
CC       Binds single-stranded (ss) DNA and RNA, but not double-stranded (ds)
CC       DNA. {ECO:0000250|UniProtKB:B4FZ81}.
CC   -!- SUBUNIT: Component of the plastid-encoded plastid RNA polymerase (PEP)
CC       complex. {ECO:0000250|UniProtKB:B4FZ81}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAD52717.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AP003106; BAD52717.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP008207; BAF06287.1; -; Genomic_DNA.
DR   EMBL; AP014957; BAS74541.1; -; Genomic_DNA.
DR   EMBL; CM000138; EEE55447.1; -; Genomic_DNA.
DR   RefSeq; XP_015621331.1; XM_015765845.1.
DR   AlphaFoldDB; Q0JIZ1; -.
DR   STRING; 4530.OS01T0769900-01; -.
DR   PaxDb; Q0JIZ1; -.
DR   PRIDE; Q0JIZ1; -.
DR   EnsemblPlants; Os01t0769900-01; Os01t0769900-01; Os01g0769900.
DR   GeneID; 4325601; -.
DR   Gramene; Os01t0769900-01; Os01t0769900-01; Os01g0769900.
DR   eggNOG; ENOG502QS8P; Eukaryota.
DR   HOGENOM; CLU_037383_0_0_1; -.
DR   InParanoid; Q0JIZ1; -.
DR   OMA; YSYMDST; -.
DR   OrthoDB; 586120at2759; -.
DR   Proteomes; UP000000763; Chromosome 1.
DR   Proteomes; UP000007752; Chromosome 1.
DR   Proteomes; UP000059680; Chromosome 1.
DR   GO; GO:0009507; C:chloroplast; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR   GO; GO:0000427; C:plastid-encoded plastid RNA polymerase complex; IEA:EnsemblPlants.
DR   GO; GO:0042793; P:plastid transcription; IBA:GO_Central.
DR   GO; GO:0090228; P:positive regulation of red or far-red light signaling pathway; IEA:EnsemblPlants.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IBA:GO_Central.
DR   GO; GO:0009637; P:response to blue light; IEA:EnsemblPlants.
DR   GO; GO:0010218; P:response to far red light; IEA:EnsemblPlants.
DR   GO; GO:0010114; P:response to red light; IEA:EnsemblPlants.
DR   InterPro; IPR034581; PTAC12.
DR   PANTHER; PTHR35720; PTHR35720; 1.
PE   3: Inferred from homology;
KW   Chloroplast; Plastid; Reference proteome; Transcription;
KW   Transcription regulation; Transit peptide.
FT   TRANSIT         1..47
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   CHAIN           48..551
FT                   /note="Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12,
FT                   chloroplastic"
FT                   /id="PRO_0000441848"
FT   REGION          76..161
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          463..529
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        465..497
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   551 AA;  62581 MW;  AB41B5AB993457CB CRC64;
     MASCSRTWLL PGMAPQATAQ TVPRPLQSLK VFAGLPHRRR VLFSGVSSRT RRGRIRSVKD
     DSLHFDPSKI EAPPYSSYFD STSGQLEPAS GARASIPGQE YWPEGTASRV RAARAPAPVG
     ESAGTPSFGK KPGSRRKGYK EQVASATAGR GTETSGDEGE SVVAIEASSD ETLEETKDSL
     DEYVVYEMPK EENLSEYEMD KMMGRPHPFV DPQKAMSVGE PKSSEELWWN WRRKSEENEM
     WSRWQRRRPD VDTVFAKAMA ETGQIKIFGD HPTRTEAALA KARRHLFKEE RLEAEQRRLE
     EIGPIAYYSE WVEAYKNKDT SREAVQKHFE ETGEDENTQL ITMFQHQTAG EFRIMMGTDV
     RIQRDPLAMR MREDQIKQIW GGDPVYPTIN YVHDPDEVAD YRGPEFHEPT PEVVPYLMEH
     GIMITKEELY ARLNEEMEDI NQDITYLPEV RDPMATAVDI GEHSYNEDSD DDEEDADKVV
     AQPESLEDDE DDGDDAEDAE GKVSRNWSVL KTTGQAENPK EKSKKDQLSL KEAIADSENL
     TDFLMDFEED E