ID   PTCD3_XENTR             Reviewed;         670 AA.
AC   Q0IHP3; Q5EAN0;
DT   02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT   03-OCT-2006, sequence version 1.
DT   03-AUG-2022, entry version 71.
DE   RecName: Full=Pentatricopeptide repeat-containing protein 3, mitochondrial;
DE   Flags: Precursor;
GN   Name=ptcd3;
OS   Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX   NCBI_TaxID=8364;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=N6; TISSUE=Oviduct;
RG   NIH - Xenopus Gene Collection (XGC) project;
RL   Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Mitochondrial protein that may have a role in mitochondrial
CC       translation. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the mitochondrion-specific ribosomal protein
CC       mS39 family. {ECO:0000305}.
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DR   EMBL; BC090356; AAH90356.1; -; mRNA.
DR   EMBL; BC123049; AAI23050.1; -; mRNA.
DR   RefSeq; NP_001072165.2; NM_001078697.2.
DR   AlphaFoldDB; Q0IHP3; -.
DR   SMR; Q0IHP3; -.
DR   STRING; 8364.ENSXETP00000060726; -.
DR   DNASU; 548397; -.
DR   GeneID; 548397; -.
DR   KEGG; xtr:548397; -.
DR   CTD; 55037; -.
DR   Xenbase; XB-GENE-961480; ptcd3.
DR   eggNOG; KOG4422; Eukaryota.
DR   InParanoid; Q0IHP3; -.
DR   OrthoDB; 405419at2759; -.
DR   Proteomes; UP000008143; Chromosome 1.
DR   Proteomes; UP000790000; Unplaced.
DR   GO; GO:0005739; C:mitochondrion; ISS:UniProtKB.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0043024; F:ribosomal small subunit binding; ISS:UniProtKB.
DR   GO; GO:0019843; F:rRNA binding; ISS:UniProtKB.
DR   GO; GO:0032543; P:mitochondrial translation; ISS:UniProtKB.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR002885; Pentatricopeptide_repeat.
DR   InterPro; IPR037387; PTCD3.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   PANTHER; PTHR16276; PTHR16276; 1.
DR   Pfam; PF13812; PPR_3; 2.
DR   PROSITE; PS51375; PPR; 4.
PE   2: Evidence at transcript level;
KW   Mitochondrion; Reference proteome; Repeat; Ribonucleoprotein;
KW   Ribosomal protein; RNA-binding; rRNA-binding; Transit peptide;
KW   Translation regulation.
FT   TRANSIT         1..13
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           14..670
FT                   /note="Pentatricopeptide repeat-containing protein 3,
FT                   mitochondrial"
FT                   /id="PRO_0000305033"
FT   REPEAT          129..163
FT                   /note="PPR 1"
FT   REPEAT          164..199
FT                   /note="PPR 2"
FT   REPEAT          209..239
FT                   /note="PPR 3"
FT   REPEAT          240..274
FT                   /note="PPR 4"
FT   REPEAT          275..314
FT                   /note="PPR 5"
FT   REPEAT          315..351
FT                   /note="PPR 6"
FT   REPEAT          352..392
FT                   /note="PPR 7"
FT   REPEAT          396..430
FT                   /note="PPR 8"
FT   REPEAT          438..472
FT                   /note="PPR 9"
FT   REPEAT          473..507
FT                   /note="PPR 10"
FT   REPEAT          556..590
FT                   /note="PPR 11"
FT   REGION          187..213
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          648..670
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        650..664
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        254
FT                   /note="F -> Y (in Ref. 1; AAH90356)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        664
FT                   /note="S -> SES (in Ref. 1; AAH90356)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   670 AA;  76051 MW;  339079E2D56C5837 CRC64;
     MAAPCVRLGS VRCTGTLLRY FCGSARHRAA AASHEEIDIP RRKSWDKTAV LQALAYTVSH
     DPTAAHYMFQ DEPFLAPKTS SEFRLYSLSK ESGRNAAKYI IGTYPNLFQN DVAEPHIPCL
     MPENLQPQVE GVSEEALKER IQLRRVKESV DLFDQLLQGG TAPSLETTNK LLDLISFYGD
     REPVRDIQTS EQEQQEVQDQ QETEDPKKRP RQYRKASEIL GSWRENNNAE RIFNLMPERN
     AHSFCTLIQG MAKFGSSSKA FNIYTDLMNN RLTADVQTFN ALILAAPDIK EKYNEKWDLI
     VELLKHMVQQ NVRPNLLTFN SVLKSLRKCG PMAKGLALQT INEMKALNIE PSLATYNHLL
     GVFYKGALSP RGQTEILSEV LDEIEGRSFT LRDPDDVYFF TNAMRVCLDL KDIELAYRLH
     TLQQTADNRG LMGDFYLQST YYGRFFNLLC MMESIDIILK WYRELIPSLY YPNSRGMLDL
     LQALDMDNRL DLIPQIWKDI KQIGHSNKVE LVEEVLNLMA RDIQPPELQA AFGDTALDIK
     SLYEVKDRVR VALEWSAGSL GNVSALLARA GKTVEAWKML QLFKKSHRVP STEVLDEFLS
     RAKVDANTNL AISLVQLAVG FCLPNTAKLA QRVMEEFTVS EEQRLTLEDL QKSHSSSSSS
     SSSSSDSDRE