ATP5S_RAT
ID ATP5S_RAT Reviewed; 200 AA.
AC Q5XIM4;
DT 21-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=ATP synthase subunit s, mitochondrial {ECO:0000305};
DE AltName: Full=ATP synthase-coupling factor B;
DE AltName: Full=Distal membrane arm assembly complex 2-like protein {ECO:0000250|UniProtKB:Q99766};
DE AltName: Full=Mitochondrial ATP synthase regulatory component factor B;
DE Flags: Precursor;
GN Name=Dmac2l {ECO:0000312|RGD:1359208};
GN Synonyms=Atp5s {ECO:0000312|RGD:1359208};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Involved in regulation of mitochondrial membrane ATP
CC synthase. Necessary for H(+) conduction of ATP synthase. Facilitates
CC energy-driven catalysis of ATP synthesis by blocking a proton leak
CC through an alternative proton exit pathway.
CC {ECO:0000250|UniProtKB:P22027}.
CC -!- SUBUNIT: Homotetramer. Associates with ATP synthase.
CC {ECO:0000250|UniProtKB:P22027}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250|UniProtKB:P22027}.
CC Mitochondrion inner membrane {ECO:0000250|UniProtKB:P22027}.
CC -!- SIMILARITY: Belongs to the ATP synthase subunit s family.
CC {ECO:0000305}.
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DR EMBL; BC083655; AAH83655.1; -; mRNA.
DR RefSeq; NP_001007750.1; NM_001007749.1.
DR RefSeq; XP_006240236.1; XM_006240174.3.
DR RefSeq; XP_006240237.1; XM_006240175.3.
DR RefSeq; XP_006240238.1; XM_006240176.3.
DR AlphaFoldDB; Q5XIM4; -.
DR SMR; Q5XIM4; -.
DR STRING; 10116.ENSRNOP00000006509; -.
DR iPTMnet; Q5XIM4; -.
DR PhosphoSitePlus; Q5XIM4; -.
DR PaxDb; Q5XIM4; -.
DR PRIDE; Q5XIM4; -.
DR Ensembl; ENSRNOT00000006509; ENSRNOP00000006509; ENSRNOG00000004893.
DR GeneID; 362749; -.
DR KEGG; rno:362749; -.
DR UCSC; RGD:1359208; rat.
DR CTD; 27109; -.
DR RGD; 1359208; Dmac2l.
DR eggNOG; KOG3864; Eukaryota.
DR GeneTree; ENSGT00940000156502; -.
DR HOGENOM; CLU_100746_0_0_1; -.
DR InParanoid; Q5XIM4; -.
DR OMA; CAEWIIK; -.
DR OrthoDB; 1395428at2759; -.
DR PhylomeDB; Q5XIM4; -.
DR TreeFam; TF315274; -.
DR Reactome; R-RNO-163210; Formation of ATP by chemiosmotic coupling.
DR Reactome; R-RNO-8949613; Cristae formation.
DR PRO; PR:Q5XIM4; -.
DR Proteomes; UP000002494; Chromosome 6.
DR Bgee; ENSRNOG00000004893; Expressed in heart and 20 other tissues.
DR Genevisible; Q5XIM4; RN.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0045263; C:proton-transporting ATP synthase complex, coupling factor F(o); IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0006811; P:ion transport; IEA:UniProtKB-KW.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR026063; ATP5S/ATP5SL.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR13382:SF10; PTHR13382:SF10; 1.
PE 2: Evidence at transcript level;
KW ATP synthesis; CF(0); Hydrogen ion transport; Ion transport;
KW Leucine-rich repeat; Magnesium; Membrane; Metal-binding; Mitochondrion;
KW Mitochondrion inner membrane; Reference proteome; Repeat; Transit peptide;
KW Transport.
FT TRANSIT 1..25
FT /note="Mitochondrion"
FT /evidence="ECO:0000250|UniProtKB:P22027"
FT CHAIN 26..200
FT /note="ATP synthase subunit s, mitochondrial"
FT /id="PRO_0000002541"
FT REPEAT 62..87
FT /note="LRR 1"
FT /evidence="ECO:0000250|UniProtKB:P22027"
FT REPEAT 88..116
FT /note="LRR 2"
FT /evidence="ECO:0000250|UniProtKB:P22027"
FT REPEAT 117..141
FT /note="LRR 3"
FT /evidence="ECO:0000250|UniProtKB:P22027"
FT REPEAT 142..173
FT /note="LRR 4"
FT /evidence="ECO:0000250|UniProtKB:P22027"
FT REGION 1..61
FT /note="N-terminal domain"
FT /evidence="ECO:0000250|UniProtKB:P22027"
FT BINDING 59
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:P22027"
FT BINDING 93
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:P22027"
SQ SEQUENCE 200 AA; 23324 MW; 8EC195A78F6B3978 CRC64;
MMMFGKISRQ LFSLKKIPWS CDSRYFWEWL NTVFNKVDYE RIKDVGPDRA ASEWLLRCGA
KVRYCGHQKW LQDYNKLPGG SVDRYKIQAI DATDSCIMDI GFDHLVGLEH VERITLCRCH
YIEDNCLQRL SQLENLRKSL LELEIIACGN VTDNGVIALR HFKNLKYLFL SDLPGIKDKE
YLAEVFTKAL PSLELKLNLK